Factsheet for TraesCS1B01G156700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0428700-01	Rice	extracellular	80.56	79.3
Os10t0439100-00	Rice	extracellular	78.17	77.25
TraesCS4B01G272600.1	Wheat	extracellular	74.6	74.31
TraesCS4B01G272800.1	Wheat	extracellular	73.81	73.52
TraesCS4B01G272700.1	Wheat	extracellular	73.02	72.73
TraesCS5B01G528500.1	Wheat	extracellular	72.62	72.05
TraesCS5B01G528700.1	Wheat	extracellular	73.02	71.88
EER91570	Sorghum	extracellular	70.63	70.92
TraesCS4B01G271300.1	Wheat	extracellular	71.43	70.87
KXG38462	Sorghum	extracellular	70.63	70.36
Zm00001d032885_P001	Maize	plastid	58.73	70.14
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	47.62	68.97
EER94179	Sorghum	extracellular	69.05	68.77
Zm00001d032884_P001	Maize	extracellular	68.65	68.65
EER91571	Sorghum	extracellular	68.25	67.98
Zm00001d032886_P001	Maize	extracellular	67.86	67.86
Zm00001d032882_P001	Maize	extracellular	68.25	66.93
CDY66063	Canola	cytosol, extracellular, plastid	41.67	63.64
TraesCS3B01G199900.1	Wheat	extracellular	61.9	62.15
TraesCS5B01G548500.1	Wheat	extracellular	62.7	61.96
KRH51669	Soybean	extracellular	61.9	61.9
TraesCS3B01G348000.1	Wheat	extracellular	61.11	61.85
TraesCS3B01G347900.1	Wheat	extracellular	60.32	61.04
EER94181	Sorghum	extracellular, plastid, vacuole	69.44	60.14
TraesCS3B01G200100.1	Wheat	extracellular	58.73	58.04
Zm00001d032883_P001	Maize	extracellular	67.46	58.02
Bra016473.1-P	Field mustard	extracellular	36.51	54.12
Solyc07g063210.2.1	Tomato	extracellular	49.6	48.83
VIT_19s0014g02910.t01	Wine grape	extracellular	49.21	48.25
TraesCS5B01G528400.1	Wheat	extracellular	32.94	47.7
TraesCS1B01G214300.1	Wheat	extracellular	47.22	45.59
TraesCS1B01G214200.1	Wheat	extracellular	46.83	45.21
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	44.44	45.16
AT3G15370.2	Thale cress	extracellular	50.4	45.04
TraesCS7B01G293800.1	Wheat	extracellular	23.02	28.86
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	49.6	28.09

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PFscan:PS51257	PANTHER:PTHR31867	PANTHER:PTHR31867:SF14	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1B01G156700	EnsemblPlants:TraesCS1B01G156700.1	SEG:seg

Description

No Description!

Coordinates

chr1B:+:264763073..264764778

Molecular Weight (calculated)

27158.2 Da

IEP (calculated)

7.859

GRAVY (calculated)

0.048

Length

252 amino acids

Sequence
(BLAST)

001: MDMAKPSLVF GTVLAACLAL AAADWSPAHA TFYGGNDASG TMGGACGYSN LYDQGYGVDN AALSTALFND GASCGQCYLI ICDTSKTRWC KPGTAVTVSA
101: TNLCPPNWAL PSDNGGWCNT PRQHFDMSQP AWEKIAIYRA GIVPVLYQRV KCWRQGGVRF TIAGFNYFEL VLITNVAGSG SVAMASIKGS NTGWIQMSRN
201: WGANWQCLSG LAGQALSFAV TTTGGQYLLF ENVVPAWWKF GQTFTTYKQF DY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.