Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- plastid 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G528700.1 | Wheat | extracellular | 89.08 | 60.55 |
| HORVU5Hr1G119860.2 | Barley | extracellular | 87.93 | 60.24 |
| TraesCS5B01G528500.1 | Wheat | extracellular | 86.78 | 59.45 |
| TraesCS4B01G271300.1 | Wheat | extracellular | 84.48 | 57.87 |
| Zm00001d035112_P001 | Maize | extracellular | 64.37 | 54.9 |
| HORVU5Hr1G119670.1 | Barley | extracellular | 87.93 | 54.45 |
| TraesCS4B01G272600.1 | Wheat | extracellular | 78.74 | 54.15 |
| TraesCS4B01G272800.1 | Wheat | extracellular | 78.16 | 53.75 |
| HORVU5Hr1G119680.4 | Barley | extracellular | 86.78 | 53.36 |
| TraesCS4B01G272700.1 | Wheat | extracellular | 77.01 | 52.96 |
| Zm00001d035101_P001 | Maize | extracellular | 63.22 | 51.89 |
| Zm00001d035104_P001 | Maize | cytosol, extracellular, plastid | 62.64 | 51.42 |
| TraesCS1B01G156700.1 | Wheat | extracellular | 68.97 | 47.62 |
| Zm00001d035111_P001 | Maize | extracellular | 63.79 | 43.7 |
| Zm00001d035100_P001 | Maize | extracellular | 63.79 | 43.36 |
| Zm00001d035108_P001 | Maize | extracellular | 63.22 | 43.31 |
| Zm00001d035102_P001 | Maize | extracellular | 63.22 | 43.31 |
| Zm00001d035109_P001 | Maize | extracellular | 62.07 | 42.52 |
| EES13270 | Sorghum | extracellular | 62.07 | 41.54 |
| EES13271 | Sorghum | extracellular | 61.49 | 41.31 |
| TraesCS3B01G348000.1 | Wheat | extracellular | 55.17 | 38.55 |
| EES14433 | Sorghum | plastid | 60.92 | 38.13 |
| TraesCS3B01G199900.1 | Wheat | extracellular | 54.6 | 37.85 |
| TraesCS3B01G347900.1 | Wheat | extracellular | 54.02 | 37.75 |
| TraesCS5B01G548500.1 | Wheat | extracellular | 55.17 | 37.65 |
| KRH51669 | Soybean | extracellular | 52.3 | 36.11 |
| TraesCS3B01G200100.1 | Wheat | extracellular | 52.87 | 36.08 |
| CDY66063 | Canola | cytosol, extracellular, plastid | 31.61 | 33.33 |
| Solyc07g063210.2.1 | Tomato | extracellular | 45.4 | 30.86 |
| TraesCS1B01G214300.1 | Wheat | extracellular | 43.1 | 28.74 |
| TraesCS1B01G214200.1 | Wheat | extracellular | 43.1 | 28.74 |
| VIT_19s0014g02910.t01 | Wine grape | extracellular | 40.8 | 27.63 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 39.08 | 27.42 |
| AT3G15370.2 | Thale cress | extracellular | 41.95 | 25.89 |
| Bra016473.1-P | Field mustard | extracellular | 24.14 | 24.71 |
| TraesCS5B01G528400.1 | Wheat | extracellular | 17.82 | 17.82 |
| PGSC0003DMT400032334 | Potato | cytosol, nucleus, vacuole | 43.68 | 17.08 |
| TraesCS7B01G293800.1 | Wheat | extracellular | 9.77 | 8.46 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0009664 |
| GO:GO:0009987 | GO:GO:0016043 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31867 | PANTHER:PTHR31867:SF14 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
| SUPFAM:SSF50685 | EnsemblPlantsGene:TraesCS5B01G528600 | EnsemblPlants:TraesCS5B01G528600.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:+:687260150..687260674
Molecular Weight (calculated)
19474.4 Da
IEP (calculated)
8.374
GRAVY (calculated)
-0.024
Length
174 amino acids
Sequence
(BLAST)
(BLAST)
001: MLPHHLRHKQ VCKPGTPITV SVTNFCPPNW ALPSDNGGWC NPPRVHFDMS QPAWENLAIY RAGIVPVLYQ QVACQRQGGL RFTINGFNYF ELVLVSNIAM
101: SGSIKSMSVK GTNTAWIPMS QNWGADCQCL AGLQGQALSF VITSSGGQYK VFQDIVPAWW LFGQIFTTWQ QFDY
101: SGSIKSMSVK GTNTAWIPMS QNWGADCQCL AGLQGQALSF VITSSGGQYK VFQDIVPAWW LFGQIFTTWQ QFDY
001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF
Arabidopsis Description
EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.