Factsheet for TraesCS7B01G218200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G314100.1	Wheat	extracellular	96.37	92.64
HORVU7Hr1G075680.1	Barley	extracellular	91.53	87.98
EES14420	Sorghum	extracellular	68.55	63.91
Zm00001d035083_P001	Maize	extracellular	66.13	59.21
VIT_14s0068g00600.t01	Wine grape	extracellular	56.05	55.38
Bra023523.1-P	Field mustard	cytosol	49.6	52.56
VIT_07s0005g04850.t01	Wine grape	extracellular	49.19	50.83
CDY04077	Canola	extracellular	50.4	50.81
CDY44393	Canola	extracellular	50.0	50.41
Bra033099.1-P	Field mustard	extracellular	50.0	50.41
Bra025397.1-P	Field mustard	extracellular	49.6	49.4
CDX86367	Canola	extracellular	49.6	49.4
CDX90986	Canola	extracellular	50.0	49.01
CDX85546	Canola	extracellular	50.0	49.01
CDX85270	Canola	extracellular	49.19	49.0
Solyc03g115270.1.1	Tomato	extracellular	50.81	48.65
Solyc03g115320.1.1	Tomato	extracellular	50.81	48.46
Solyc03g115350.1.1	Tomato	extracellular	50.4	48.45
Solyc03g115310.1.1	Tomato	extracellular	50.4	48.26
Solyc03g115300.1.1	Tomato	extracellular	49.19	47.1
KRH44992	Soybean	extracellular	49.19	47.1
KRH01265	Soybean	extracellular	42.74	46.49
GSMUA_Achr4P27950_001	Banana	extracellular	45.56	45.94
AT5G39270.1	Thale cress	extracellular	51.61	45.88
Solyc03g115340.1.1	Tomato	mitochondrion	32.66	45.76
GSMUA_Achr4P27910_001	Banana	extracellular	45.16	45.53
GSMUA_Achr4P28010_001	Banana	extracellular	45.16	45.53
AT5G39290.1	Thale cress	extracellular	51.21	45.52
CDY15952	Canola	extracellular	46.77	45.49
Bra030353.1-P	Field mustard	extracellular	46.77	45.49
CDY37873	Canola	extracellular	49.6	45.22
CDX74479	Canola	extracellular	49.6	45.22
Bra028232.1-P	Field mustard	extracellular	49.19	44.85
AT5G39280.1	Thale cress	extracellular	49.6	44.73
AT5G39300.1	Thale cress	extracellular	49.6	44.57
TraesCS1B01G156700.1	Wheat	extracellular	45.16	44.44
CDX99666	Canola	extracellular	47.18	43.49
TraesCS3B01G199900.1	Wheat	extracellular	43.55	43.03
TraesCS3B01G348000.1	Wheat	extracellular	43.15	42.97
TraesCS1B01G214200.1	Wheat	extracellular	45.16	42.91
TraesCS1B01G214300.1	Wheat	extracellular	45.16	42.91
TraesCS3B01G347900.1	Wheat	extracellular	42.74	42.57
TraesCS4B01G271300.1	Wheat	extracellular	43.55	42.52
TraesCS3B01G200100.1	Wheat	extracellular	43.55	42.35
TraesCS4B01G272600.1	Wheat	extracellular	43.15	42.29
TraesCS5B01G528500.1	Wheat	extracellular	43.15	42.13
TraesCS4B01G272700.1	Wheat	extracellular	42.74	41.9
TraesCS4B01G272800.1	Wheat	extracellular	42.74	41.9
AT5G39260.1	Thale cress	extracellular	43.95	41.6
TraesCS5B01G528700.1	Wheat	extracellular	42.74	41.41
TraesCS5B01G548500.1	Wheat	extracellular	42.34	41.18
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	27.42	39.08
AT5G39310.1	Thale cress	extracellular	48.39	38.46
TraesCS5B01G528400.1	Wheat	extracellular	22.98	32.76
Os12t0546800-01	Rice	plasma membrane	37.1	31.72
TraesCS7B01G293800.1	Wheat	extracellular	22.58	27.86
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	44.76	27.07
PGSC0003DMT400063363	Potato	extracellular	50.4	25.61

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF33	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	EnsemblPlantsGene:TraesCS7B01G218200	EnsemblPlants:TraesCS7B01G218200.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr7B:+:403416011..403416856

Molecular Weight (calculated)

26524.5 Da

IEP (calculated)

7.336

GRAVY (calculated)

-0.091

Length

248 amino acids

Sequence
(BLAST)

001: METRRPAVSA VSVGAAAVAS GGWMDAHATF YGDETGAETM QGACGYGNLF EQGYGLDTTA LSVALFSDGW SCGCCYEIQC HGDPHCKPGG APVTVTATNL
101: CPANYSKPYE NWCNPSLKHF DLSKPMFLRL VTDFHVGIIP VQYRRVPCAK KGGIRIEMTG NQYWVGVLVF NVAGPGEVKA LAVKGSKDGQ WRNMKGNWGQ
201: IWDGDVQNLV GQGLSFRVVA SDGRSVVLGA VVPASWTIGQ SFEGKGQF

Best Arabidopsis Sequence Match ( AT2G37640.1 )
(BLAST)

001: MTATAFRVGL WLAVTASFLL TATNAKIPGV YSGGPWQNAH ATFYGGSDAS GTMGGACGYG NLYSQGYGVN TAALSTALFN NGFSCGACFE IKCTDDPRWC
101: VPGNPSILVT ATNFCPPNFA QPSDDGGWCN PPREHFDLAM PMFLKIGLYR AGIVPVSYRR VPCRKIGGIR FTVNGFRYFN LVLVTNVAGA GDINGVSVKG
201: SKTDWVRMSR NWGQNWQSNA VLIGQSLSFR VTASDRRSST SWNVAPATWQ FGQTFSGKNF RV

Arabidopsis Description

EXPA3EXP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VPK3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.