Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G39300.1 | Thale cress | extracellular | 70.23 | 66.67 |
| AT5G39280.1 | Thale cress | extracellular | 69.08 | 65.82 |
| AT5G39270.1 | Thale cress | extracellular | 69.47 | 65.23 |
| AT5G39290.1 | Thale cress | extracellular | 69.08 | 64.87 |
| CDY37873 | Canola | extracellular | 65.65 | 63.24 |
| CDX74479 | Canola | extracellular | 65.27 | 62.87 |
| Bra028232.1-P | Field mustard | extracellular | 64.89 | 62.5 |
| KRH01265 | Soybean | extracellular | 46.18 | 53.07 |
| Solyc03g115320.1.1 | Tomato | extracellular | 51.91 | 52.31 |
| Solyc03g115310.1.1 | Tomato | extracellular | 50.38 | 50.97 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 46.18 | 50.42 |
| KRH44992 | Soybean | extracellular | 49.62 | 50.19 |
| Solyc03g115300.1.1 | Tomato | extracellular | 49.24 | 49.81 |
| Solyc03g115270.1.1 | Tomato | extracellular | 49.24 | 49.81 |
| Solyc03g115340.1.1 | Tomato | mitochondrion | 33.59 | 49.72 |
| Solyc03g115350.1.1 | Tomato | extracellular | 48.85 | 49.61 |
| AT5G39310.1 | Thale cress | extracellular | 56.49 | 47.44 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 41.6 | 43.95 |
| GSMUA_Achr4P27950_001 | Banana | extracellular | 41.22 | 43.9 |
| GSMUA_Achr4P28010_001 | Banana | extracellular | 40.84 | 43.5 |
| GSMUA_Achr4P27910_001 | Banana | extracellular | 40.46 | 43.09 |
| HORVU7Hr1G075680.1 | Barley | extracellular | 42.37 | 43.02 |
| TraesCS7D01G314100.1 | Wheat | extracellular | 41.98 | 42.64 |
| AT1G12560.1 | Thale cress | extracellular | 42.37 | 42.37 |
| EES14420 | Sorghum | extracellular | 42.37 | 41.73 |
| AT1G62980.1 | Thale cress | extracellular | 39.69 | 40.47 |
| Zm00001d035083_P001 | Maize | extracellular | 41.98 | 39.71 |
| AT3G15370.2 | Thale cress | extracellular | 38.17 | 35.46 |
| Os12t0546800-01 | Rice | plasma membrane | 36.26 | 32.76 |
| PGSC0003DMT400063359 | Potato | cytosol, plastid, vacuole | 46.18 | 29.51 |
| PGSC0003DMT400063363 | Potato | extracellular | 47.71 | 25.61 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | EntrezGene:833922 | ProteinID:AED94413.1 | ArrayExpress:AT5G39260 |
| EnsemblPlantsGene:AT5G39260 | RefSeq:AT5G39260 | TAIR:AT5G39260 | RefSeq:AT5G39260-TAIR-G | EnsemblPlants:AT5G39260.1 | TAIR:AT5G39260.1 |
| Symbol:ATEXPA21 | ProteinID:BAB09381.1 | EMBL:BT002841 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 |
| GO:GO:0071555 | InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | RefSeq:NP_198742.2 |
| PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 |
| PANTHER:PTHR31867 | PANTHER:PTHR31867:SF70 | UniProt:Q9FL81 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 |
| SUPFAM:SSF49590 | SUPFAM:SSF50685 | TMHMM:TMhelix | UniParc:UPI000000BDF1 | : | : |
Description
EXPA21Expansin-A21 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL81]
Coordinates
chr5:-:15726243..15727458
Molecular Weight (calculated)
28135.8 Da
IEP (calculated)
8.302
GRAVY (calculated)
0.045
Length
262 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLLEKMTYV ECFMIIMATW FMFISYSHGA NVAAAPGTNG LDTAWYDARA AYYGDIHGGG TELEGACGYG DLNKHGYGLA TAALSTALFN SGASCGACYE
101: IMCSPNPQGC LSGSIKITAT DLCPPGSAWC YLPNKHFDLS LPMFIKIAQV KAKMVPVRYR RVPCAKTGGV KFEVKGNPNI LTILPYNVGG AGDIIAVSAK
201: GSKTAWVVMS RYWGQNWTTN VNLTGQSVSL RVTTSDGITK DFTDVMPASW GFGQTFDGKT NF
101: IMCSPNPQGC LSGSIKITAT DLCPPGSAWC YLPNKHFDLS LPMFIKIAQV KAKMVPVRYR RVPCAKTGGV KFEVKGNPNI LTILPYNVGG AGDIIAVSAK
201: GSKTAWVVMS RYWGQNWTTN VNLTGQSVSL RVTTSDGITK DFTDVMPASW GFGQTFDGKT NF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.