Factsheet for Bra028232.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX74479	Canola	extracellular	99.63	99.63
CDY37873	Canola	extracellular	98.53	98.53
AT5G39270.1	Thale cress	extracellular	77.94	75.99
AT5G39290.1	Thale cress	extracellular	76.84	74.91
AT5G39280.1	Thale cress	extracellular	72.79	72.0
AT5G39300.1	Thale cress	extracellular	72.79	71.74
Bra030353.1-P	Field mustard	extracellular	62.5	66.67
AT5G39260.1	Thale cress	extracellular	62.5	64.89
Bra023523.1-P	Field mustard	cytosol	52.94	61.54
Solyc03g115350.1.1	Tomato	extracellular	53.31	56.2
KRH01265	Soybean	extracellular	47.06	56.14
Bra033099.1-P	Field mustard	extracellular	50.74	56.1
VIT_07s0005g04850.t01	Wine grape	extracellular	49.26	55.83
Solyc03g115310.1.1	Tomato	extracellular	52.94	55.6
Bra025397.1-P	Field mustard	extracellular	50.74	55.42
Solyc03g115270.1.1	Tomato	extracellular	52.57	55.21
KRH44992	Soybean	extracellular	52.57	55.21
Solyc03g115320.1.1	Tomato	extracellular	52.21	54.62
Solyc03g115300.1.1	Tomato	extracellular	51.47	54.05
Solyc03g115340.1.1	Tomato	mitochondrion	32.72	50.28
Bra025800.1-P	Field mustard	cytosol, extracellular, plastid	11.4	49.21
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	44.85	49.19
Bra033068.1-P	Field mustard	cytosol	16.91	48.42
HORVU7Hr1G075680.1	Barley	extracellular	45.59	48.06
Bra000142.1-P	Field mustard	extracellular	29.04	47.88
TraesCS7D01G314100.1	Wheat	extracellular	44.85	47.29
Bra019775.1-P	Field mustard	extracellular	43.75	45.25
Bra027249.1-P	Field mustard	cytosol, extracellular, plastid	37.87	44.78
EES14420	Sorghum	extracellular	43.75	44.74
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	39.34	44.58
Bra016767.1-P	Field mustard	extracellular	43.01	44.49
Bra026965.1-P	Field mustard	extracellular	42.65	44.11
GSMUA_Achr4P27950_001	Banana	extracellular	39.71	43.9
GSMUA_Achr4P28010_001	Banana	extracellular	39.34	43.5
Zm00001d035083_P001	Maize	extracellular	44.12	43.32
GSMUA_Achr4P27910_001	Banana	extracellular	38.97	43.09
Bra001593.1-P	Field mustard	extracellular	38.6	41.83
Bra016473.1-P	Field mustard	extracellular	24.63	39.41
Os12t0546800-01	Rice	plasma membrane	36.4	34.14
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	48.16	31.95
PGSC0003DMT400063363	Potato	extracellular	52.57	29.3

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EnsemblPlantsGene:Bra028232	EnsemblPlants:Bra028232.1	EnsemblPlants:Bra028232.1-P
InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	UniProt:M4EHG7	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF70	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	UniParc:UPI00025447B2	:	:

Description

AT5G39270 (E=9e-121) ATEXPA22, EXP22, ATEXP22, ATHEXP ALPHA 1.15 | ATEXPA22 (ARABIDOPSIS THALIANA EXPANSIN A22)

Coordinates

chrA04:-:6910005..6911329

Molecular Weight (calculated)

30340.6 Da

IEP (calculated)

8.531

GRAVY (calculated)

-0.178

Length

272 amino acids

Sequence
(BLAST)

001: MKLNFEKMMY VKVLMMVIAI WFVPMTYSNE AQAPAGDVAE APGTDRFNND WYDARATFYG DIHGGDTQMG ACGYGDLFKQ GYGLATAALS PALFNDGYTC
101: GACYEIMCTR DPQWCLPGSI KITATNLCPA NYTKTTDIWC NPPQKHFDLS MPMFLKIAKY KAGVVPVRYR RIPCTKNGGV KFETSGNPYF LMILPYNVGG
201: AGDINAMQIK GSTTGWINMR KNWGQHWTTN IVLTGQGLSF MVRTSDGVVK QFMNVAPNNW GFQQTFDGRI NF

Best Arabidopsis Sequence Match ( AT5G39270.1 )
(BLAST)

001: MKLLEKMIYV EFLMIIMVIW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDTNWYD ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKGNK TGWITMKKNW GQNWTTITVL TGQGLSFRVT TSDGITKDFW NVMPKNWGFG QTFDGRINF

Arabidopsis Description

EXPA22Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.