Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 9
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g115270.1.1 | Tomato | extracellular | 89.58 | 89.58 |
| Solyc03g115300.1.1 | Tomato | extracellular | 85.71 | 85.71 |
| Solyc03g115350.1.1 | Tomato | extracellular | 82.63 | 82.95 |
| Solyc03g115320.1.1 | Tomato | extracellular | 82.63 | 82.31 |
| Solyc03g115340.1.1 | Tomato | mitochondrion | 53.28 | 77.97 |
| VIT_14s0068g00600.t01 | Wine grape | extracellular | 66.8 | 68.92 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 61.39 | 66.25 |
| Bra023523.1-P | Field mustard | cytosol | 57.14 | 63.25 |
| CDY04077 | Canola | extracellular | 58.3 | 61.38 |
| CDY44393 | Canola | extracellular | 57.92 | 60.98 |
| KRH01265 | Soybean | extracellular | 53.67 | 60.96 |
| Bra033099.1-P | Field mustard | extracellular | 57.53 | 60.57 |
| CDX85546 | Canola | extracellular | 58.3 | 59.68 |
| CDX86367 | Canola | extracellular | 57.14 | 59.44 |
| Bra025397.1-P | Field mustard | extracellular | 57.14 | 59.44 |
| KRH44992 | Soybean | extracellular | 59.07 | 59.07 |
| CDX90986 | Canola | extracellular | 57.53 | 58.89 |
| CDX85270 | Canola | extracellular | 56.37 | 58.63 |
| CDY15952 | Canola | extracellular | 55.21 | 56.08 |
| Bra030353.1-P | Field mustard | extracellular | 55.21 | 56.08 |
| AT5G39280.1 | Thale cress | extracellular | 58.3 | 54.91 |
| AT5G39300.1 | Thale cress | extracellular | 58.3 | 54.71 |
| CDX99666 | Canola | extracellular | 56.76 | 54.65 |
| CDX74479 | Canola | extracellular | 55.98 | 53.31 |
| CDY37873 | Canola | extracellular | 55.98 | 53.31 |
| Bra028232.1-P | Field mustard | extracellular | 55.6 | 52.94 |
| AT5G39270.1 | Thale cress | extracellular | 55.98 | 51.97 |
| AT5G39290.1 | Thale cress | extracellular | 55.98 | 51.97 |
| GSMUA_Achr4P27950_001 | Banana | extracellular | 47.88 | 50.41 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 48.26 | 50.4 |
| AT5G39260.1 | Thale cress | extracellular | 50.97 | 50.38 |
| GSMUA_Achr4P27910_001 | Banana | extracellular | 47.49 | 50.0 |
| TraesCS7D01G314100.1 | Wheat | extracellular | 49.42 | 49.61 |
| GSMUA_Achr4P28010_001 | Banana | extracellular | 46.72 | 49.19 |
| HORVU7Hr1G075680.1 | Barley | extracellular | 48.65 | 48.84 |
| Solyc08g080060.2.1 | Tomato | extracellular | 49.81 | 47.96 |
| AT5G39310.1 | Thale cress | extracellular | 56.76 | 47.12 |
| EES14420 | Sorghum | extracellular | 48.26 | 46.99 |
| Zm00001d035083_P001 | Maize | extracellular | 48.26 | 45.13 |
| Solyc07g063210.2.1 | Tomato | extracellular | 44.4 | 44.92 |
| Solyc08g007780.2.1 | Tomato | extracellular | 20.08 | 40.94 |
| Os12t0546800-01 | Rice | plasma membrane | 40.54 | 36.21 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom |
| InterPro:Expansin_CBD | InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0008150 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | UniProt:K4BL33 | PFAM:PF01357 |
| PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 |
| PANTHER:PTHR31867:SF33 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 |
| SignalP:SignalP-noTM | EnsemblPlantsGene:Solyc03g115310.1 | EnsemblPlants:Solyc03g115310.1.1 | TMHMM:TMhelix | UniParc:UPI000276879B | SEG:seg |
Description
No Description!
Coordinates
chr3:-:65073399..65074292
Molecular Weight (calculated)
28912.6 Da
IEP (calculated)
8.139
GRAVY (calculated)
-0.140
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKHQICFIL FITFIVIFLV AAFESKEVER NLDEQGWNNA RATFYGDMSG NETMQGACGY GDLFKQGYGL ETAALSTALF NNGATCGACF QIKCVNAPKA
101: CHPDQIITIT ATNFCPPNYT KTHDIWCNPP QQHFDLSLPM FLKIAEYKAG VVPVVYRRVT CQKKGGLKFE IKGNPNWILV LVFNVGGVGD VVNVKIKGSK
201: IQWLPMSRNW GQNWQTSVQL GGQSLSFQVQ TSDGKWVQSD NVVPDNWQFG QTFEAKNNF
101: CHPDQIITIT ATNFCPPNYT KTHDIWCNPP QQHFDLSLPM FLKIAEYKAG VVPVVYRRVT CQKKGGLKFE IKGNPNWILV LVFNVGGVGD VVNVKIKGSK
201: IQWLPMSRNW GQNWQTSVQL GGQSLSFQVQ TSDGKWVQSD NVVPDNWQFG QTFEAKNNF
001: MNLLGKMIYV EGFMMIMATL LVSMSYGHRA MINDVAEAPV FDDVVSPNGL DSSWYDARAT FYGDIHGGET QQGACGYGDL FKQGYGLETA ALSTALFNEG
101: YTCGACYQIM CVNDPQWCLP GSVKITATNF CPPDYSKTEG VWCNPPQKHF DLSLPMFLKI AQYKAGVVPV KYRRISCART GGVKFETKGN PYFLMILPYN
201: VGGAGDIKLM QVKGDKTGWI TMQKNWGQNW TTGVNLTGQG ISFRVTTSDG VTKDFNNVMP NNWGFGQTFD GKINF
101: YTCGACYQIM CVNDPQWCLP GSVKITATNF CPPDYSKTEG VWCNPPQKHF DLSLPMFLKI AQYKAGVVPV KYRRISCART GGVKFETKGN PYFLMILPYN
201: VGGAGDIKLM QVKGDKTGWI TMQKNWGQNW TTGVNLTGQG ISFRVTTSDG VTKDFNNVMP NNWGFGQTFD GKINF
Arabidopsis Description
EXPA23Expansin-A23 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL79]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.