CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra030353.1-P	Field mustard	extracellular	92.94	98.04
CDY15952	Canola	extracellular	92.94	98.04
CDX74479	Canola	extracellular	65.06	64.34
CDY37873	Canola	extracellular	65.06	64.34
AT5G39310.1	Thale cress	extracellular	71.0	61.22
CDY44393	Canola	extracellular	54.65	59.76
VIT_07s0005g04850.t01	Wine grape	extracellular	53.16	59.58
CDX86367	Canola	extracellular	55.02	59.44
CDY04077	Canola	extracellular	54.28	59.35
CDX85270	Canola	extracellular	53.9	58.23
Solyc03g115310.1.1	Tomato	extracellular	54.65	56.76
KRH01265	Soybean	extracellular	47.96	56.58
Solyc03g115270.1.1	Tomato	extracellular	54.28	56.37
Solyc03g115350.1.1	Tomato	extracellular	53.53	55.81
Solyc03g115320.1.1	Tomato	extracellular	53.9	55.77
CDX85546	Canola	extracellular	52.42	55.73
KRH44992	Soybean	extracellular	53.53	55.6
Solyc03g115300.1.1	Tomato	extracellular	53.16	55.21
CDX90986	Canola	extracellular	51.3	54.55
CDY44069	Canola	extracellular	30.48	52.56
Solyc03g115340.1.1	Tomato	mitochondrion	33.83	51.41
CDY66063	Canola	cytosol, extracellular, plastid	30.48	49.7
CDY71009	Canola	extracellular	36.8	49.25
CDY71742	Canola	extracellular	36.8	49.25
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	43.49	47.18
GSMUA_Achr4P27950_001	Banana	extracellular	42.75	46.75
GSMUA_Achr4P28010_001	Banana	extracellular	42.75	46.75
GSMUA_Achr4P27910_001	Banana	extracellular	42.01	45.94
HORVU7Hr1G075680.1	Barley	extracellular	43.87	45.74
TraesCS7D01G314100.1	Wheat	extracellular	43.87	45.74
EES14420	Sorghum	extracellular	44.24	44.74
CDX75827	Canola	extracellular	36.06	43.69
CDY69805	Canola	extracellular	24.54	42.86
Zm00001d035083_P001	Maize	extracellular	43.87	42.6
CDX97663	Canola	extracellular	39.41	42.23
CDX98555	Canola	extracellular	39.41	42.23
CDY58613	Canola	extracellular	40.89	41.83
CDX98053	Canola	extracellular	40.89	41.83
CDY21056	Canola	extracellular	40.89	41.83
CDY16014	Canola	extracellular	40.52	41.44
CDY57071	Canola	extracellular	40.52	41.44
CDY64890	Canola	extracellular	39.41	41.25
CDX82436	Canola	extracellular	37.92	40.64
CDY44426	Canola	extracellular	15.99	35.54
Os12t0546800-01	Rice	plasma membrane	37.55	34.83
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	49.07	32.2
PGSC0003DMT400063363	Potato	extracellular	54.28	29.92

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	GO:A0A078EEY2	EnsemblPlants:CDX99666	ProteinID:CDX99666
ProteinID:CDX99666.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf
GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043
EnsemblPlantsGene:GSBRNA2T00108182001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867
PANTHER:PTHR31867:SF70	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EE2CCE	SEG:seg	:	:

Description

BnaC04g34230D

Coordinates

chrLK031912:+:741506..743761

Molecular Weight (calculated)

29626.7 Da

IEP (calculated)

8.824

GRAVY (calculated)

-0.246

Length

269 amino acids

Sequence
(BLAST)

001: MKPSHYGAFL HSQLMILMMA MVIWIVPMTY GHDHGHGHGH HAPVAGWLDA RATFYGDING GQTHQGACGY GDLHKQGFGL ATAALSTALF NNGYTCGACY
101: EIKCANSPQW CLPGSIKITA TNFCPPDPSN KKDSWCNPPQ KHFDLSQPMF LKIAQYKAGV VPVRYRRVHC TKTGGVKFEI KGNPHFVMVL PYNVGGAGDI
201: KELCIKGTKT DWIKMQKNWG QIWNSGVVMT GQCLSFRITT SDGSTKDFMD VTPTNWGFNG QAFDGKINF

Best Arabidopsis Sequence Match ( AT5G39310.1 )
(BLAST)

001: MELLKRKLYA KILMMVMVIW IAPMTNGHDH ASHVPGGRPG AHPSHGAHPA HGAHPSHGAH PSHGAHPSHG AHPSHGALPS HGGQVPHSGW GHGRATFYGD
101: INGGETQQGA CGYGDLHKQG YGLETAALST ALFNNGSRCG ACYEIMCEHA PQWCLPGSIK ITATNFCPPD FTKPNDNWCN PPQKHFDLSQ PMFLKIAKYK
201: AGVVPVKFRR VPCAKIGGVK FEIKGNPHFL MILPYNVGGA GAVRAMQIKG TRTQWIAMKK NWGQIWSTGV VLTGQCLSFR LTTSDGVMKE FIDVTPPDWK
301: CNGQSFDGKV NF

Arabidopsis Description

EXPA24Expansin-A24 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL76]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.