Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra036638.1-P | Field mustard | extracellular, mitochondrion, nucleus, plastid | 93.39 | 100.0 |
| CDY69805 | Canola | extracellular | 59.53 | 99.35 |
| AT1G62980.1 | Thale cress | extracellular | 86.38 | 86.38 |
| CDY21056 | Canola | extracellular | 73.54 | 71.86 |
| CDY58613 | Canola | extracellular | 73.15 | 71.48 |
| CDX98053 | Canola | extracellular | 72.76 | 71.1 |
| CDY16014 | Canola | extracellular | 72.37 | 70.72 |
| CDY57071 | Canola | extracellular | 71.98 | 70.34 |
| PGSC0003DMT400032527 | Potato | extracellular | 54.47 | 67.31 |
| PGSC0003DMT400058522 | Potato | plastid | 62.65 | 65.71 |
| KRH77459 | Soybean | extracellular | 62.65 | 61.92 |
| Solyc08g080060.2.1 | Tomato | extracellular | 64.59 | 61.71 |
| KRH04002 | Soybean | extracellular | 63.03 | 61.13 |
| KRH27987 | Soybean | extracellular | 61.48 | 60.77 |
| VIT_02s0025g04700.t01 | Wine grape | extracellular | 62.26 | 60.61 |
| Zm00001d047353_P001 | Maize | extracellular | 60.7 | 60.47 |
| GSMUA_Achr5P20270_001 | Banana | extracellular | 60.7 | 59.09 |
| EER94586 | Sorghum | extracellular | 60.7 | 59.09 |
| GSMUA_Achr10P... | Banana | extracellular | 59.53 | 58.85 |
| TraesCS1D01G203100.1 | Wheat | extracellular | 59.14 | 58.69 |
| TraesCS1A01G199400.1 | Wheat | extracellular | 58.75 | 58.3 |
| TraesCS1B01G214200.1 | Wheat | extracellular | 58.75 | 57.85 |
| Os10t0535900-00 | Rice | extracellular | 59.53 | 57.52 |
| TraesCS1B01G214300.1 | Wheat | extracellular | 58.37 | 57.47 |
| TraesCS1A01G199300.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 58.75 | 53.74 |
| KRH57276 | Soybean | extracellular | 46.69 | 52.4 |
| CDY44069 | Canola | extracellular | 31.52 | 51.92 |
| CDY71009 | Canola | extracellular | 40.47 | 51.74 |
| CDY71742 | Canola | extracellular | 40.47 | 51.74 |
| CDY66063 | Canola | cytosol, extracellular, plastid | 31.13 | 48.48 |
| CDX75827 | Canola | extracellular | 40.86 | 47.3 |
| CDX98555 | Canola | extracellular | 44.75 | 45.82 |
| CDX97663 | Canola | extracellular | 44.75 | 45.82 |
| CDX82436 | Canola | extracellular | 44.75 | 45.82 |
| CDX90986 | Canola | extracellular | 43.58 | 44.27 |
| Solyc08g007780.2.1 | Tomato | extracellular | 21.79 | 44.09 |
| CDX85546 | Canola | extracellular | 43.19 | 43.87 |
| CDY04077 | Canola | extracellular | 41.25 | 43.09 |
| CDY44393 | Canola | extracellular | 40.86 | 42.68 |
| CDY15952 | Canola | extracellular | 41.25 | 41.57 |
| CDX85270 | Canola | extracellular | 40.08 | 41.37 |
| CDX86367 | Canola | extracellular | 39.69 | 40.96 |
| CDX74479 | Canola | extracellular | 42.41 | 40.07 |
| CDY37873 | Canola | extracellular | 42.41 | 40.07 |
| CDX99666 | Canola | extracellular | 41.25 | 39.41 |
| CDY44426 | Canola | extracellular | 17.12 | 36.36 |
| HORVU1Hr1G051590.1 | Barley | plastid | 17.9 | 15.33 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | GO:A0A078JEM5 | UniProt:A0A078JEM5 | EnsemblPlants:CDY64890 |
| ProteinID:CDY64890 | ProteinID:CDY64890.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 | EnsemblPlantsGene:GSBRNA2T00043814001 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF2 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EECF57 | : | : | : | : |
Description
BnaA09g52970DBnaA09g52970D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEM5]
Coordinates
chrLK034592:+:5497..6990
Molecular Weight (calculated)
27921.9 Da
IEP (calculated)
9.531
GRAVY (calculated)
-0.193
Length
257 amino acids
Sequence
(BLAST)
(BLAST)
001: MDQSLYSKCL VILSVMGMIG TSSAAYAGGP WRRASATFYG DETARETMGG ACGYGNLWNS GYGAATSALS TVLFNDGYSC GQCFQIRCVS SPNCYYGSPA
101: TVVTATNICP PNWGQNSNNG GWCNPPRAHF DLTKPAFMKI ANWKAGIIPI SYRRVACKRT GGIRFKFEGN GYWLLVYVMN VGGAGDIKTM AVKGSRTNWI
201: NMSHNWGASY QAFSSLYGQS LSFRLTSYTT RQTIYAWNAA PASWSAGQTY KSNANFS
101: TVVTATNICP PNWGQNSNNG GWCNPPRAHF DLTKPAFMKI ANWKAGIIPI SYRRVACKRT GGIRFKFEGN GYWLLVYVMN VGGAGDIKTM AVKGSRTNWI
201: NMSHNWGASY QAFSSLYGQS LSFRLTSYTT RQTIYAWNAA PASWSAGQTY KSNANFS
001: MDQNLYRKCL VILSMMAMIG TSMATYAGTP WRTASATFYG DDTGSATMGG ACGYGNMYDS GYGVATTALS TALFNEGYAC GQCFQLKCVS SPNCYYGSPA
101: TVVTATNICP PNYGQASNNG GWCNPPRVHF DLTKPAFMKI ANWKAGIIPV SYRRVACKKI GGIRFKFEGN GYWLLVYVMN VGGPGDIKTM AVKGSRTGWI
201: NMSHNWGASY QAFSSLYGQS LSFRLTSYTT RQTIYAYNAA PASWSAGKTY QSKANFN
101: TVVTATNICP PNYGQASNNG GWCNPPRVHF DLTKPAFMKI ANWKAGIIPV SYRRVACKKI GGIRFKFEGN GYWLLVYVMN VGGPGDIKTM AVKGSRTGWI
201: NMSHNWGASY QAFSSLYGQS LSFRLTSYTT RQTIYAYNAA PASWSAGKTY QSKANFN
Arabidopsis Description
EXPA18Expansin-A18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ07]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.