Factsheet for GSMUA_Achr10P06590_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15400_001	Banana	extracellular	74.23	73.66
GSMUA_Achr5P20270_001	Banana	extracellular	73.08	71.97
KRH77459	Soybean	extracellular	70.38	70.38
PGSC0003DMT400032527	Potato	extracellular	56.15	70.19
KRH27987	Soybean	extracellular	69.62	69.62
VIT_02s0025g04700.t01	Wine grape	extracellular	70.38	69.32
Zm00001d047353_P001	Maize	extracellular	67.69	68.22
PGSC0003DMT400058522	Potato	plastid	64.23	68.16
KRH04002	Soybean	extracellular	68.46	67.17
EER94586	Sorghum	extracellular	67.69	66.67
TraesCS1B01G214300.1	Wheat	extracellular	66.54	66.28
TraesCS1A01G199400.1	Wheat	extracellular	65.77	66.02
TraesCS1D01G203100.1	Wheat	extracellular	65.77	66.02
Os10t0535900-00	Rice	extracellular	66.92	65.41
TraesCS1B01G214200.1	Wheat	extracellular	65.0	64.75
CDX98053	Canola	extracellular	64.62	63.88
CDY57071	Canola	extracellular	64.62	63.88
Bra019775.1-P	Field mustard	extracellular	64.62	63.88
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	58.85	63.75
CDY58613	Canola	extracellular	64.23	63.5
Solyc08g080060.2.1	Tomato	extracellular	65.38	63.2
CDY21056	Canola	extracellular	63.85	63.12
CDY16014	Canola	extracellular	63.85	63.12
Bra026965.1-P	Field mustard	extracellular	63.85	63.12
Bra016767.1-P	Field mustard	extracellular	63.85	63.12
AT1G12560.1	Thale cress	extracellular	63.46	62.98
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	65.77	60.85
CDY64890	Canola	extracellular	58.85	59.53
CDY69805	Canola	extracellular	34.23	57.79
KRH57276	Soybean	extracellular	50.77	57.64
AT1G62980.1	Thale cress	extracellular	56.92	57.59
Solyc08g007780.2.1	Tomato	extracellular	25.0	51.18
GSMUA_Achr11P...	Banana	extracellular	47.69	49.6
GSMUA_Achr1P00140_001	Banana	extracellular	42.69	45.68
GSMUA_Achr4P28010_001	Banana	extracellular	42.69	45.12
GSMUA_Achr4P27910_001	Banana	extracellular	42.69	45.12
GSMUA_Achr4P27950_001	Banana	extracellular	42.31	44.72
GSMUA_AchrUn_...	Banana	extracellular	33.46	38.33
HORVU1Hr1G051590.1	Barley	plastid	21.15	18.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312
EnsemblPlantsGene:GSMUA_Achr10G06590_001	EnsemblPlants:GSMUA_Achr10P06590_001	EnsemblPlants:GSMUA_Achr10T06590_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	UniProt:M0RFY6	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000294DF7E
SEG:seg	:	:	:	:	:

Description

Putative expansin-A30 [Source:GMGC_GENE;Acc:GSMUA_Achr10G06590_001]

Coordinates

chr10:-:16919095..16920035

Molecular Weight (calculated)

27705.0 Da

IEP (calculated)

8.627

GRAVY (calculated)

0.093

Length

260 amino acids

Sequence
(BLAST)

001: MASSSSSSLL CNLGLLVLAM AIARAGAVFR PTPWSMAHAT FYGDESASET MGGACGYGNL FSTGYGTNTA ALSSVLFKDG FGCGSCYQIR CSGASACYRG
101: SPIITVTATN LCPPNWAQPS DNGGWCNPPR VHFDMSKPAF MKIADWHAGI VPVMYRRVPC PVRGGIRFLL QGNGYWLLAF VTNVGGGGDV ARMWVKGSNT
201: GWISMSQNWG ASYQAFSSLG GQSLSFKIMS YTTRNTIIAS EVAPSNWNVG LTYEATVNFH

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.