Factsheet for TraesCS1D01G203100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G199400.1	Wheat	extracellular	98.46	98.46
TraesCS1B01G214200.1	Wheat	extracellular	98.46	97.7
TraesCS1B01G214300.1	Wheat	extracellular	98.07	97.32
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	98.46	90.75
Zm00001d047353_P001	Maize	extracellular	74.13	74.42
Os10t0535900-00	Rice	extracellular	76.06	74.06
EER94586	Sorghum	extracellular	74.13	72.73
PGSC0003DMT400032527	Potato	extracellular	53.28	66.35
GSMUA_Achr10P...	Banana	extracellular	66.02	65.77
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	58.69	63.33
PGSC0003DMT400058522	Potato	plastid	59.85	63.27
KRH77459	Soybean	extracellular	62.55	62.31
KRH27987	Soybean	extracellular	62.16	61.92
KRH04002	Soybean	extracellular	63.32	61.89
GSMUA_Achr5P20270_001	Banana	extracellular	62.93	61.74
VIT_02s0025g04700.t01	Wine grape	extracellular	61.78	60.61
Bra026965.1-P	Field mustard	extracellular	61.39	60.46
CDY16014	Canola	extracellular	61.39	60.46
AT1G12560.1	Thale cress	extracellular	61.0	60.31
CDX98053	Canola	extracellular	60.23	59.32
CDY21056	Canola	extracellular	60.23	59.32
CDY58613	Canola	extracellular	60.23	59.32
Bra019775.1-P	Field mustard	extracellular	60.23	59.32
Bra016767.1-P	Field mustard	extracellular	60.23	59.32
CDY57071	Canola	extracellular	60.23	59.32
CDY64890	Canola	extracellular	58.69	59.14
Solyc08g080060.2.1	Tomato	extracellular	59.85	57.62
AT1G62980.1	Thale cress	extracellular	55.98	56.42
CDY69805	Canola	extracellular	32.43	54.55
KRH57276	Soybean	extracellular	46.33	52.4
TraesCS3D01G175800.1	Wheat	extracellular	49.81	51.39
TraesCS3D01G313400.1	Wheat	extracellular	47.88	49.8
TraesCS7D01G019600.1	Wheat	plastid	50.19	49.62
TraesCS3D01G313300.1	Wheat	extracellular	45.95	48.77
TraesCS3D01G313100.1	Wheat	extracellular	46.72	48.59
TraesCS3D01G313200.1	Wheat	extracellular	46.33	48.19
TraesCS5D01G535500.1	Wheat	extracellular	47.1	47.84
TraesCS4D01G270500.1	Wheat	extracellular	45.56	46.46
TraesCS3D01G176000.1	Wheat	extracellular	45.56	46.27
TraesCS5D01G527700.1	Wheat	extracellular	45.56	46.27
Solyc08g007780.2.1	Tomato	extracellular	22.39	45.67
TraesCS7D01G314100.1	Wheat	extracellular	45.17	45.35
TraesCS4D01G271900.1	Wheat	extracellular	44.02	45.06
TraesCS4D01G271800.1	Wheat	extracellular	43.24	44.98
TraesCS5D01G527800.1	Wheat	extracellular	44.4	44.92
TraesCS4D01G271700.1	Wheat	extracellular	43.24	44.27
TraesCS3D01G030100.1	Wheat	extracellular	28.19	35.61
HORVU1Hr1G051590.1	Barley	plastid	25.87	22.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS1D01G203100	EnsemblPlants:TraesCS1D01G203100.1	SEG:seg	:

Description

No Description!

Coordinates

chr1D:+:286750111..286750984

Molecular Weight (calculated)

27482.8 Da

IEP (calculated)

8.714

GRAVY (calculated)

0.096

Length

259 amino acids

Sequence
(BLAST)

001: MASAASKSAA VLVLLVSLAG VATTVDARFR AMQWTPAHAT FYGDEATAET MGGACGYDIT AGYGADTAAL SSTLFLDGYG CGTCYQIRCV KATACYRGSP
101: VITVTATNLC PPNWAQDTNN GGWCNPPRTH FDLAIPAFKK MADWHAGIVP VMYRRVPCMR KGGIRFAFQG NPHWLLVYVT NVGGAGDVGE MWVKGGGSMG
201: WLRMSHNWGA SYQAFGQLGG QALSFKLTSY TTGLTIVAAD AAPASWSIGL TYQARANFK

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.