Factsheet for TraesCS3D01G030100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66063	Canola	cytosol, extracellular, plastid	43.41	53.94
Bra016473.1-P	Field mustard	extracellular	39.51	47.65
Os06t0718100-01	Rice	plastid	52.68	41.06
TraesCS3D01G175800.1	Wheat	extracellular	48.78	39.84
KRH51669	Soybean	extracellular	45.85	37.3
TraesCS3D01G313100.1	Wheat	extracellular	44.88	36.95
TraesCS3D01G313400.1	Wheat	extracellular	44.88	36.95
TraesCS5D01G535500.1	Wheat	extracellular	45.85	36.86
TraesCS4D01G271900.1	Wheat	extracellular	45.37	36.76
TraesCS4D01G271800.1	Wheat	extracellular	43.9	36.14
TraesCS5D01G527800.1	Wheat	extracellular	44.88	35.94
TraesCS3D01G313200.1	Wheat	extracellular	43.41	35.74
TraesCS3D01G313300.1	Wheat	extracellular	42.44	35.66
TraesCS4D01G271700.1	Wheat	extracellular	43.9	35.57
TraesCS5D01G527700.1	Wheat	extracellular	43.9	35.29
TraesCS4D01G270500.1	Wheat	extracellular	42.93	34.65
TraesCS3D01G176000.1	Wheat	extracellular	42.44	34.12
TraesCS1D01G203100.1	Wheat	extracellular	35.61	28.19
TraesCS7D01G314100.1	Wheat	extracellular	34.15	27.13
TraesCS7D01G019600.1	Wheat	plastid	33.17	25.95
Solyc07g063210.2.1	Tomato	extracellular	31.22	25.0
VIT_19s0014g02910.t01	Wine grape	extracellular	31.22	24.9
AT3G15370.2	Thale cress	extracellular	31.22	22.7
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	31.71	14.61

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112
InterPro:IPR036908	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS51257
PANTHER:PTHR31867	PANTHER:PTHR31867:SF19	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF50685
SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3D01G030100	EnsemblPlants:TraesCS3D01G030100.1	:	:	:

Description

No Description!

Coordinates

chr3D:-:10897511..10898239

Molecular Weight (calculated)

22199.8 Da

IEP (calculated)

8.554

GRAVY (calculated)

0.058

Length

205 amino acids

Sequence
(BLAST)

001: MAPARFVAGM LLAAIACVLS VAADNPTTPS QQPFVWQKAH ATFYGGADAS DTMSGACGYG NLFSEGYGTR TAALSTVLFN DGAACGQCYK IACDRKRADP
101: LFCKPGVTVT VTATNFCPPN DALPNDNGGW CNPPRPHFDM AQPAWEKIGV YKGVHSINCV FFKLTSIMHS VNRYVILVLC MVTHAYKKET LFESKLKFVL
201: LNGRK

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.