Factsheet for TraesCS3D01G313100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G313400.1	Wheat	extracellular	95.98	95.98
HORVU3Hr1G076620.1	Barley	extracellular	95.98	95.98
HORVU3Hr1G076640.2	Barley	extracellular	95.58	95.58
HORVU3Hr1G076670.1	Barley	extracellular	95.58	95.58
TraesCS3D01G313200.1	Wheat	extracellular	95.18	95.18
TraesCS3D01G313300.1	Wheat	extracellular	93.17	95.08
TraesCS3B01G347900.1	Wheat	extracellular	94.78	94.78
TraesCS3A01G318000.1	Wheat	extracellular	94.78	94.78
TraesCS3A01G318100.1	Wheat	extracellular	94.78	94.78
HORVU3Hr1G076630.1	Barley	extracellular	75.9	84.75
TraesCS3D01G175800.1	Wheat	extracellular	74.7	74.1
GSMUA_Achr11P...	Banana	extracellular	69.48	69.2
TraesCS5D01G535500.1	Wheat	extracellular	69.48	67.84
TraesCS3D01G176000.1	Wheat	extracellular	67.07	65.49
HORVU0Hr1G032890.2	Barley	extracellular	53.41	65.2
TraesCS5D01G527700.1	Wheat	extracellular	62.65	61.18
TraesCS4D01G271700.1	Wheat	extracellular	61.04	60.08
TraesCS5D01G527800.1	Wheat	extracellular	61.45	59.77
TraesCS4D01G271800.1	Wheat	extracellular	59.44	59.44
TraesCS4D01G271900.1	Wheat	extracellular	60.24	59.29
TraesCS4D01G270500.1	Wheat	extracellular	59.04	57.87
TraesCS1D01G203100.1	Wheat	extracellular	48.59	46.72
Solyc07g063210.2.1	Tomato	extracellular	47.39	46.09
VIT_19s0014g02910.t01	Wine grape	extracellular	46.99	45.53
TraesCS3D01G030100.1	Wheat	extracellular	36.95	44.88
AT3G15370.2	Thale cress	extracellular	49.8	43.97
TraesCS7D01G314100.1	Wheat	extracellular	44.98	43.41
TraesCS7D01G019600.1	Wheat	plastid	41.37	39.31
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	46.99	26.29

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF32	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3D01G313100	EnsemblPlants:TraesCS3D01G313100.1	SEG:seg	:

Description

No Description!

Coordinates

chr3D:-:427279668..427280516

Molecular Weight (calculated)

27052.8 Da

IEP (calculated)

7.650

GRAVY (calculated)

-0.108

Length

249 amino acids

Sequence
(BLAST)

001: METPSLLLLT TLLAFAFKTS VAQWMPAFAT FYGGSDASDT MGGACGYGNL YNAGYGVNSA ALSTALFNNG ASCGMCFTIT CDASKTQSCK QGTSITITAT
101: NFCPPNYALA SDNGGWCNPP RHHFDMSQPA WETIAVYQAG IVPVNYRRVP CQRSGGMRFT INGNDYFELV TVANVGGSGV VSQMWIKGSK TDWMIMSRNW
201: GASWQSNAYL NGQSLSFKVQ TDDGRVVTAN NVVPYNWWFG GTYTSWQQF

Best Arabidopsis Sequence Match ( AT4G01630.1 )
(BLAST)

001: MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV AGGGEISKVW IKGSKSNKWE
201: TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP SNWRFGQSFK SNVNF

Arabidopsis Description

EXPA17EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.