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Wine grape
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 6
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH77459 Soybean extracellular 76.52 77.69
PGSC0003DMT400032527 Potato extracellular 60.23 76.44
KRH27987 Soybean extracellular 74.62 75.77
PGSC0003DMT400058522 Potato plastid 68.94 74.29
GSMUA_Achr10P... Banana extracellular 69.32 70.38
Solyc08g080060.2.1 Tomato extracellular 68.94 67.66
Bra036638.1-P Field mustard extracellular, mitochondrion, nucleus, plastid 60.61 66.67
Zm00001d047353_P001 Maize extracellular 64.77 66.28
EER94586 Sorghum extracellular 65.53 65.53
Bra026965.1-P Field mustard extracellular 64.77 65.02
CDX98053 Canola extracellular 64.77 65.02
CDY16014 Canola extracellular 64.77 65.02
CDY57071 Canola extracellular 64.77 65.02
Bra019775.1-P Field mustard extracellular 64.77 65.02
CDY21056 Canola extracellular 64.39 64.64
CDY58613 Canola extracellular 64.39 64.64
Bra016767.1-P Field mustard extracellular 64.39 64.64
AT1G12560.1 Thale cress extracellular 62.88 63.36
CDY64890 Canola extracellular 60.61 62.26
GSMUA_Achr5P20270_001 Banana extracellular 62.12 62.12
Os10t0535900-00 Rice extracellular 62.5 62.03
AT1G62980.1 Thale cress extracellular 60.23 61.87
TraesCS1D01G203100.1 Wheat extracellular 60.61 61.78
CDY69805 Canola extracellular 35.61 61.04
TraesCS1A01G199400.1 Wheat extracellular 59.85 61.0
TraesCS1B01G214200.1 Wheat extracellular 59.85 60.54
TraesCS1B01G214300.1 Wheat extracellular 59.85 60.54
TraesCS1A01G199300.1 Wheat cytosol, extracellular, peroxisome, plastid 60.23 56.58
Solyc08g007780.2.1 Tomato extracellular 24.62 51.18
VIT_14s0068g00600.t01 Wine grape extracellular 46.97 49.4
VIT_07s0005g04850.t01 Wine grape extracellular 42.8 47.08
VIT_19s0014g02910.t01 Wine grape extracellular 40.15 41.25
HORVU1Hr1G051590.1 Barley plastid 19.7 17.33
Protein Annotations
EntrezGene:100266697wikigene:100266697Gene3D:2.40.40.10Gene3D:2.60.40.760MapMan:21.4.2.1ProteinID:CBI34775
ProteinID:CBI34775.3UniProt:D7TWA0InterPro:Expan_Lol_pIInterPro:ExpansinInterPro:Expansin/allergen_DPBB_domInterPro:Expansin_CBD
InterPro:Expansin_CBD_sfEMBL:FN596251GO:GO:0005575GO:GO:0005576GO:GO:0005618GO:GO:0005623
GO:GO:0008150GO:GO:0009664GO:GO:0009987GO:GO:0016020GO:GO:0016043GO:GO:0030312
InterPro:IPR007112InterPro:IPR007117InterPro:IPR036749InterPro:IPR036908EntrezGene:LOC100266697wikigene:LOC100266697
PFAM:PF01357PFAM:PF03330PRINTS:PR01225PRINTS:PR01226PFscan:PS50842PFscan:PS50843
PANTHER:PTHR31867PANTHER:PTHR31867:SF2InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF49590
SUPFAM:SSF50685TMHMM:TMhelixUniParc:UPI00015CD0FEArrayExpress:VIT_02s0025g04700EnsemblPlantsGene:VIT_02s0025g04700EnsemblPlants:VIT_02s0025g04700.t01
RefSeq:XP_002275613RefSeq:XP_002275613.1::::
Description
No Description!
Coordinates
chr2:-:4249303..4250807
Molecular Weight (calculated)
28738.5 Da
IEP (calculated)
9.583
GRAVY (calculated)
0.043
Length
264 amino acids
Sequence
(BLAST)
001: MASSLHSWGC RFLFMGLVFT IIAKSTLAVA PVFRPSRWAL AHATFYGDDT ASETMGGACG YGNLFLNGYG TDTVALSSTL FNNGYSCGSC YQIKCVQSSA
101: CYKGSPYTTV TATNLCPPNW AQDSNAGGWC NPPRVHFDMS KPAFMKIAQW KAGIIPVMYR RVPCVKRGGL QFSFQGNGYW LLVYVMNVGG GGDIASMWVK
201: GSKTGWISMS HNWGASYQAF ATLKGQALSF KLISYSTKQI LVANNVAPSN WNVGMTYKAN VNFH
Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)
001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
Arabidopsis Description
EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.