Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 6
- plastid 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH77459 | Soybean | extracellular | 76.52 | 77.69 |
PGSC0003DMT400032527 | Potato | extracellular | 60.23 | 76.44 |
KRH27987 | Soybean | extracellular | 74.62 | 75.77 |
PGSC0003DMT400058522 | Potato | plastid | 68.94 | 74.29 |
GSMUA_Achr10P... | Banana | extracellular | 69.32 | 70.38 |
Solyc08g080060.2.1 | Tomato | extracellular | 68.94 | 67.66 |
Bra036638.1-P | Field mustard | extracellular, mitochondrion, nucleus, plastid | 60.61 | 66.67 |
Zm00001d047353_P001 | Maize | extracellular | 64.77 | 66.28 |
EER94586 | Sorghum | extracellular | 65.53 | 65.53 |
Bra026965.1-P | Field mustard | extracellular | 64.77 | 65.02 |
CDX98053 | Canola | extracellular | 64.77 | 65.02 |
CDY16014 | Canola | extracellular | 64.77 | 65.02 |
CDY57071 | Canola | extracellular | 64.77 | 65.02 |
Bra019775.1-P | Field mustard | extracellular | 64.77 | 65.02 |
CDY21056 | Canola | extracellular | 64.39 | 64.64 |
CDY58613 | Canola | extracellular | 64.39 | 64.64 |
Bra016767.1-P | Field mustard | extracellular | 64.39 | 64.64 |
AT1G12560.1 | Thale cress | extracellular | 62.88 | 63.36 |
CDY64890 | Canola | extracellular | 60.61 | 62.26 |
GSMUA_Achr5P20270_001 | Banana | extracellular | 62.12 | 62.12 |
Os10t0535900-00 | Rice | extracellular | 62.5 | 62.03 |
AT1G62980.1 | Thale cress | extracellular | 60.23 | 61.87 |
TraesCS1D01G203100.1 | Wheat | extracellular | 60.61 | 61.78 |
CDY69805 | Canola | extracellular | 35.61 | 61.04 |
TraesCS1A01G199400.1 | Wheat | extracellular | 59.85 | 61.0 |
TraesCS1B01G214200.1 | Wheat | extracellular | 59.85 | 60.54 |
TraesCS1B01G214300.1 | Wheat | extracellular | 59.85 | 60.54 |
TraesCS1A01G199300.1 | Wheat | cytosol, extracellular, peroxisome, plastid | 60.23 | 56.58 |
Solyc08g007780.2.1 | Tomato | extracellular | 24.62 | 51.18 |
VIT_14s0068g00600.t01 | Wine grape | extracellular | 46.97 | 49.4 |
VIT_07s0005g04850.t01 | Wine grape | extracellular | 42.8 | 47.08 |
VIT_19s0014g02910.t01 | Wine grape | extracellular | 40.15 | 41.25 |
HORVU1Hr1G051590.1 | Barley | plastid | 19.7 | 17.33 |
Protein Annotations
EntrezGene:100266697 | wikigene:100266697 | Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | ProteinID:CBI34775 |
ProteinID:CBI34775.3 | UniProt:D7TWA0 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
InterPro:Expansin_CBD_sf | EMBL:FN596251 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
GO:GO:0008150 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 |
InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | EntrezGene:LOC100266697 | wikigene:LOC100266697 |
PFAM:PF01357 | PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 |
PANTHER:PTHR31867 | PANTHER:PTHR31867:SF2 | InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 |
SUPFAM:SSF50685 | TMHMM:TMhelix | UniParc:UPI00015CD0FE | ArrayExpress:VIT_02s0025g04700 | EnsemblPlantsGene:VIT_02s0025g04700 | EnsemblPlants:VIT_02s0025g04700.t01 |
RefSeq:XP_002275613 | RefSeq:XP_002275613.1 | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:4249303..4250807
Molecular Weight (calculated)
28738.5 Da
IEP (calculated)
9.583
GRAVY (calculated)
0.043
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSLHSWGC RFLFMGLVFT IIAKSTLAVA PVFRPSRWAL AHATFYGDDT ASETMGGACG YGNLFLNGYG TDTVALSSTL FNNGYSCGSC YQIKCVQSSA
101: CYKGSPYTTV TATNLCPPNW AQDSNAGGWC NPPRVHFDMS KPAFMKIAQW KAGIIPVMYR RVPCVKRGGL QFSFQGNGYW LLVYVMNVGG GGDIASMWVK
201: GSKTGWISMS HNWGASYQAF ATLKGQALSF KLISYSTKQI LVANNVAPSN WNVGMTYKAN VNFH
101: CYKGSPYTTV TATNLCPPNW AQDSNAGGWC NPPRVHFDMS KPAFMKIAQW KAGIIPVMYR RVPCVKRGGL QFSFQGNGYW LLVYVMNVGG GGDIASMWVK
201: GSKTGWISMS HNWGASYQAF ATLKGQALSF KLISYSTKQI LVANNVAPSN WNVGMTYKAN VNFH
001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
Arabidopsis Description
EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.