Factsheet for GSMUA_Achr5P20270_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	extracellular	71.97	73.08
PGSC0003DMT400032527	Potato	extracellular	56.06	71.15
Zm00001d047353_P001	Maize	extracellular	66.29	67.83
PGSC0003DMT400058522	Potato	plastid	61.74	66.53
EER94586	Sorghum	extracellular	65.91	65.91
KRH77459	Soybean	extracellular	64.39	65.38
KRH27987	Soybean	extracellular	64.39	65.38
KRH04002	Soybean	extracellular	65.53	65.28
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	58.33	64.17
Os10t0535900-00	Rice	extracellular	64.02	63.53
CDX98053	Canola	extracellular	62.88	63.12
CDY57071	Canola	extracellular	62.88	63.12
Bra019775.1-P	Field mustard	extracellular	62.88	63.12
AT1G12560.1	Thale cress	extracellular	62.5	62.98
TraesCS1D01G203100.1	Wheat	extracellular	61.74	62.93
TraesCS1A01G199400.1	Wheat	extracellular	61.74	62.93
CDY58613	Canola	extracellular	62.5	62.74
CDY21056	Canola	extracellular	62.12	62.36
Bra016767.1-P	Field mustard	extracellular	62.12	62.36
GSMUA_Achr1P15400_001	Banana	extracellular	61.74	62.21
VIT_02s0025g04700.t01	Wine grape	extracellular	62.12	62.12
TraesCS1B01G214300.1	Wheat	extracellular	61.36	62.07
Bra026965.1-P	Field mustard	extracellular	61.74	61.98
CDY16014	Canola	extracellular	61.74	61.98
TraesCS1B01G214200.1	Wheat	extracellular	60.98	61.69
Solyc08g080060.2.1	Tomato	extracellular	62.12	60.97
CDY64890	Canola	extracellular	59.09	60.7
CDY69805	Canola	extracellular	35.23	60.39
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	61.74	58.01
AT1G62980.1	Thale cress	extracellular	56.44	57.98
KRH57276	Soybean	extracellular	49.24	56.77
GSMUA_Achr11P...	Banana	extracellular	50.0	52.8
Solyc08g007780.2.1	Tomato	extracellular	23.86	49.61
GSMUA_Achr1P00140_001	Banana	extracellular	43.18	46.91
GSMUA_Achr4P28010_001	Banana	extracellular	42.05	45.12
GSMUA_Achr4P27950_001	Banana	extracellular	41.67	44.72
GSMUA_Achr4P27910_001	Banana	extracellular	41.67	44.72
GSMUA_AchrUn_...	Banana	extracellular	31.82	37.0
HORVU1Hr1G051590.1	Barley	plastid	21.97	19.33

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312
EnsemblPlantsGene:GSMUA_Achr5G20270_001	EnsemblPlants:GSMUA_Achr5P20270_001	EnsemblPlants:GSMUA_Achr5T20270_001	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	UniProt:M0T056	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226
PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF2	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf
SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI0002963AE1	:

Description

Expansin-A7 [Source:GMGC_GENE;Acc:GSMUA_Achr5G20270_001]

Coordinates

chr5:+:22008732..22009682

Molecular Weight (calculated)

28998.6 Da

IEP (calculated)

8.767

GRAVY (calculated)

0.017

Length

264 amino acids

Sequence
(BLAST)

001: MASLLWPCSL VFFLVSTATV SSALSLPIPS LRFQPGPWRY AHATFYGDES ASETMGGACG YGNLFSSGYG IATAALSSTL FNDGFACGTC YQIRCRGSPH
101: CYGSFPIITV TGTNLCPPNW AQPSDNGGWC NPPRRHFDLS KPAFMQIAYW RAGIVPVMYR RVPCVRKGGI RFLLQGNEYW LLAFVMNVGG EGDVGSMWVK
201: GSNTDWMRMS RNWGASFQAF SRLGGQSLSF KITSYTTRKT IIATDVAPST WYLGMTYEAD VNFA

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.