Factsheet for Bra026965.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY16014	Canola	extracellular	99.62	99.62
Bra016767.1-P	Field mustard	extracellular	93.16	93.16
Bra019775.1-P	Field mustard	extracellular	92.4	92.4
AT1G12560.1	Thale cress	extracellular	90.49	90.84
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	69.58	76.25
PGSC0003DMT400032527	Potato	extracellular	53.99	68.27
KRH77459	Soybean	extracellular	66.92	67.69
PGSC0003DMT400058522	Potato	plastid	62.74	67.35
KRH27987	Soybean	extracellular	66.54	67.31
KRH04002	Soybean	extracellular	65.78	65.28
VIT_02s0025g04700.t01	Wine grape	extracellular	65.02	64.77
GSMUA_Achr10P...	Banana	extracellular	63.12	63.85
Zm00001d047353_P001	Maize	extracellular	61.6	62.79
GSMUA_Achr5P20270_001	Banana	extracellular	61.98	61.74
EER94586	Sorghum	extracellular	61.98	61.74
Solyc08g080060.2.1	Tomato	extracellular	63.12	61.71
TraesCS1D01G203100.1	Wheat	extracellular	60.46	61.39
TraesCS1B01G214300.1	Wheat	extracellular	60.46	60.92
TraesCS1B01G214200.1	Wheat	extracellular	60.46	60.92
TraesCS1A01G199400.1	Wheat	extracellular	59.7	60.62
Os10t0535900-00	Rice	extracellular	61.22	60.53
KRH57276	Soybean	extracellular	49.05	56.33
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	60.08	56.23
Bra025800.1-P	Field mustard	cytosol, extracellular, plastid	13.31	55.56
Bra023523.1-P	Field mustard	cytosol	44.87	50.43
Bra000142.1-P	Field mustard	extracellular	30.42	48.48
Bra033068.1-P	Field mustard	cytosol	17.11	47.37
Bra027249.1-P	Field mustard	cytosol, extracellular, plastid	41.06	46.96
Solyc08g007780.2.1	Tomato	extracellular	22.43	46.46
Bra025397.1-P	Field mustard	extracellular	43.73	46.18
Bra033099.1-P	Field mustard	extracellular	42.59	45.53
Bra016473.1-P	Field mustard	extracellular	29.28	45.29
Bra001593.1-P	Field mustard	extracellular	42.21	44.22
Bra028232.1-P	Field mustard	extracellular	44.11	42.65
Bra030353.1-P	Field mustard	extracellular	41.06	42.35
HORVU1Hr1G051590.1	Barley	plastid	20.53	18.0

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EnsemblPlantsGene:Bra026965	EnsemblPlants:Bra026965.1	EnsemblPlants:Bra026965.1-P
InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	UniProt:M4EDV5	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF2	InterPro:RlpA-like_DPBB
InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	TMHMM:TMhelix	UniParc:UPI0002542888

Description

AT1G12560 (E=6e-146) ATEXPA7, EXP7, ATEXP7, ATHEXP ALPHA 1.26, EXPA7 | ATEXPA7 (ARABIDOPSIS THALIANA EXPANSIN A7)

Coordinates

chrA09:-:34512025..34513159

Molecular Weight (calculated)

29059.4 Da

IEP (calculated)

9.494

GRAVY (calculated)

-0.159

Length

263 amino acids

Sequence
(BLAST)

001: MGLISSSWSF KKFFAIVMVA FAISGEFVAG YYRPSPWRYA HATFYGDETG SETMGGACGY GNLFNSGYGL DTAALSTTLF KDGYGCGQCF QIVCVNSKHC
101: NYGRPSTVVT ATNLCPPNWY QDSNNGGWCN PPRTHFDMAK PAFMKLAYWR AGIIPVAYRR VPCKRSGGMR FQFQGNSYWL LVFVMNVGGA GDIKSMAVKG
201: SRTNWISMSH NWGASYQAFS SLYGQSLSFR VTSYTTGETV YAWNVAPANW NAGMTYKSGA NFR

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.