Factsheet for Bra033068.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	extracellular
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025800.1-P	Field mustard	cytosol, extracellular, plastid	46.32	69.84
CDY44426	Canola	extracellular	86.32	67.77
Bra000142.1-P	Field mustard	extracellular	66.32	38.18
Bra016473.1-P	Field mustard	extracellular	51.58	28.82
Bra023523.1-P	Field mustard	cytosol	52.63	21.37
Bra033099.1-P	Field mustard	extracellular	50.53	19.51
Bra036638.1-P	Field mustard	extracellular, mitochondrion, nucleus, plastid	47.37	18.75
Bra025397.1-P	Field mustard	extracellular	48.42	18.47
Bra030353.1-P	Field mustard	extracellular	49.47	18.43
Bra019775.1-P	Field mustard	extracellular	50.53	18.25
Bra027249.1-P	Field mustard	cytosol, extracellular, plastid	43.16	17.83
Bra016767.1-P	Field mustard	extracellular	48.42	17.49
Bra026965.1-P	Field mustard	extracellular	47.37	17.11
Bra028232.1-P	Field mustard	extracellular	48.42	16.91
Bra001593.1-P	Field mustard	extracellular	43.16	16.33

Protein Annotations

EnsemblPlants:Bra033068.1	EnsemblPlants:Bra033068.1-P	EnsemblPlantsGene:Bra033068	Gene3D:2.40.40.10	GO:GO:0005575	GO:GO:0005576
InterPro:Expan_Lol_pI	InterPro:Expansin/allergen_DPBB_dom	InterPro:IPR007112	InterPro:IPR036908	InterPro:RlpA-like_sf	PANTHER:PTHR31867
PANTHER:PTHR31867:SF1	PFscan:PS50842	PRINTS:PR01225	SUPFAM:SSF50685	UniParc:UPI0002546E63	UniProt:M4EW84
MapMan:35.1	:	:	:	:	:

Description

AT2G03090 (E=4e-031) ATEXPA15, EXP15, ATEXP15, ATHEXP ALPHA 1.3 | ATEXPA15 (ARABIDOPSIS THALIANA EXPANSIN A15)

Coordinates

chrA02:+:21557586..21558286

Molecular Weight (calculated)

9907.6 Da

IEP (calculated)

9.131

GRAVY (calculated)

-0.053

Length

95 amino acids

Sequence
(BLAST)

1: MASSVQGYDA GWVNAHATFY GRSDASGTMG AACAYGNLYS QGYGTNTAAL STALFNNGLS CGTCFERSGV RATGRGVYMR IVHYKAGVVP VSYGR

Best Arabidopsis Sequence Match ( AT2G03090.1 )
(BLAST)

001: MFMGKMGLLG IALFCFAAMV CSVHGYDAGW VNAHATFYGG SDASGTMGGA CGYGNLYSQG YGTNTAALST ALFNNGLSCG ACFEIKCQSD GAWCLPGAII
101: VTATNFCPPN NALPNNAGGW CNPPLHHFDL SQPVFQRIAQ YKAGVVPVSY RRVPCMRRGG IRFTINGHSY FNLVLVTNVG GAGDVHSVAV KGSRTRWQQM
201: SRNWGQNWQS NNLLNGQALS FKVTASDGRT VVSNNIAPAS WSFGQTFTGR QFR

Arabidopsis Description

EXPA15EXPA15 [Source:UniProtKB/TrEMBL;Acc:A0A178VZP8]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.