Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 5
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74479 | Canola | extracellular | 98.9 | 98.9 |
| Bra028232.1-P | Field mustard | extracellular | 98.53 | 98.53 |
| AT5G39270.1 | Thale cress | extracellular | 77.94 | 75.99 |
| AT5G39290.1 | Thale cress | extracellular | 76.84 | 74.91 |
| AT5G39280.1 | Thale cress | extracellular | 72.43 | 71.64 |
| AT5G39300.1 | Thale cress | extracellular | 72.43 | 71.38 |
| CDY15952 | Canola | extracellular | 63.24 | 67.45 |
| AT5G39260.1 | Thale cress | extracellular | 63.24 | 65.65 |
| CDX99666 | Canola | extracellular | 64.34 | 65.06 |
| CDX85546 | Canola | extracellular | 53.68 | 57.71 |
| Solyc03g115350.1.1 | Tomato | extracellular | 53.68 | 56.59 |
| KRH01265 | Soybean | extracellular | 47.43 | 56.58 |
| CDY04077 | Canola | extracellular | 51.1 | 56.5 |
| CDY44393 | Canola | extracellular | 51.1 | 56.5 |
| VIT_07s0005g04850.t01 | Wine grape | extracellular | 49.63 | 56.25 |
| CDX90986 | Canola | extracellular | 52.21 | 56.13 |
| Solyc03g115310.1.1 | Tomato | extracellular | 53.31 | 55.98 |
| CDX86367 | Canola | extracellular | 51.1 | 55.82 |
| KRH44992 | Soybean | extracellular | 52.94 | 55.6 |
| Solyc03g115270.1.1 | Tomato | extracellular | 52.94 | 55.6 |
| CDX85270 | Canola | extracellular | 50.37 | 55.02 |
| Solyc03g115320.1.1 | Tomato | extracellular | 52.57 | 55.0 |
| Solyc03g115300.1.1 | Tomato | extracellular | 51.84 | 54.44 |
| Solyc03g115340.1.1 | Tomato | mitochondrion | 33.09 | 50.85 |
| CDY44069 | Canola | extracellular | 28.68 | 50.0 |
| TraesCS7B01G218200.1 | Wheat | cytosol, extracellular, plastid | 45.22 | 49.6 |
| HORVU7Hr1G075680.1 | Barley | extracellular | 45.96 | 48.45 |
| CDY71009 | Canola | extracellular | 35.29 | 47.76 |
| CDY71742 | Canola | extracellular | 35.29 | 47.76 |
| TraesCS7D01G314100.1 | Wheat | extracellular | 45.22 | 47.67 |
| CDY66063 | Canola | cytosol, extracellular, plastid | 28.31 | 46.67 |
| CDX98053 | Canola | extracellular | 44.12 | 45.63 |
| EES14420 | Sorghum | extracellular | 44.12 | 45.11 |
| CDY58613 | Canola | extracellular | 43.38 | 44.87 |
| CDY21056 | Canola | extracellular | 43.38 | 44.87 |
| CDY57071 | Canola | extracellular | 43.38 | 44.87 |
| CDY16014 | Canola | extracellular | 43.01 | 44.49 |
| GSMUA_Achr4P27950_001 | Banana | extracellular | 40.07 | 44.31 |
| CDX75827 | Canola | extracellular | 36.03 | 44.14 |
| GSMUA_Achr4P28010_001 | Banana | extracellular | 39.71 | 43.9 |
| Zm00001d035083_P001 | Maize | extracellular | 44.49 | 43.68 |
| CDY69805 | Canola | extracellular | 24.63 | 43.51 |
| GSMUA_Achr4P27910_001 | Banana | extracellular | 39.34 | 43.5 |
| CDX97663 | Canola | extracellular | 39.34 | 42.63 |
| CDY64890 | Canola | extracellular | 40.07 | 42.41 |
| CDX98555 | Canola | extracellular | 38.97 | 42.23 |
| CDX82436 | Canola | extracellular | 38.6 | 41.83 |
| Os12t0546800-01 | Rice | plasma membrane | 37.13 | 34.83 |
| CDY44426 | Canola | extracellular | 15.07 | 33.88 |
| PGSC0003DMT400063359 | Potato | cytosol, plastid, vacuole | 48.53 | 32.2 |
| PGSC0003DMT400063363 | Potato | extracellular | 52.94 | 29.51 |
Protein Annotations
| Gene3D:2.40.40.10 | Gene3D:2.60.40.760 | MapMan:21.4.2.1 | GO:A0A078HLY9 | UniProt:A0A078HLY9 | EnsemblPlants:CDY37873 |
| ProteinID:CDY37873 | ProteinID:CDY37873.1 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom | InterPro:Expansin_CBD |
| InterPro:Expansin_CBD_sf | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0008150 |
| GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016043 | GO:GO:0030312 | EnsemblPlantsGene:GSBRNA2T00064838001 |
| InterPro:IPR007112 | InterPro:IPR007117 | InterPro:IPR036749 | InterPro:IPR036908 | PFAM:PF01357 | PFAM:PF03330 |
| PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PFscan:PS50843 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF70 |
| InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF49590 | SUPFAM:SSF50685 | SignalP:SignalP-TM |
| UniParc:UPI0004EB2FC4 | : | : | : | : | : |
Description
BnaC04g31330DBnaC04g31330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLY9]
Coordinates
chrLK032410:+:89387..91489
Molecular Weight (calculated)
30200.4 Da
IEP (calculated)
8.365
GRAVY (calculated)
-0.154
Length
272 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLNFEKMMY VKVLMMVIAI WFVPMTYSNG AEAPAGDVAE APGTDTFNND WYDARATFYG DIHGGDTQMG ACGYGDLFKQ GYGLATAALS PALFNDGYTC
101: GACYEIMCTR DPQWCLPGSI KITATNLCPA NYTKTTDIWC NPPQKHFDLS MPMFLKIAKY KAGVVPVRYR RVPCTKNGGV KFETSGNPYF LMILPYNVGG
201: AGDINAMQIK GSTTGWINMR KNWGQHWTTN IVLTGQGLSF MVRTSDGVVK QFMNVAPNNW GFQQTFDGRI NF
101: GACYEIMCTR DPQWCLPGSI KITATNLCPA NYTKTTDIWC NPPQKHFDLS MPMFLKIAKY KAGVVPVRYR RVPCTKNGGV KFETSGNPYF LMILPYNVGG
201: AGDINAMQIK GSTTGWINMR KNWGQHWTTN IVLTGQGLSF MVRTSDGVVK QFMNVAPNNW GFQQTFDGRI NF
001: MKLLEKMIYV EFLMIIMVIW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDTNWYD ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKGNK TGWITMKKNW GQNWTTITVL TGQGLSFRVT TSDGITKDFW NVMPKNWGFG QTFDGRINF
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKGNK TGWITMKKNW GQNWTTITVL TGQGLSFRVT TSDGITKDFW NVMPKNWGFG QTFDGRINF
Arabidopsis Description
EXPA22Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.