Factsheet for Zm00001d035083_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 2
vacuole 2
plasma membrane 3
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	extracellular
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14420	Sorghum	extracellular	78.7	81.95
TraesCS7D01G314100.1	Wheat	extracellular	61.73	66.28
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	59.21	66.13
HORVU7Hr1G075680.1	Barley	extracellular	60.65	65.12
VIT_14s0068g00600.t01	Wine grape	extracellular	49.1	54.18
CDX85270	Canola	extracellular	47.29	52.61
CDX86367	Canola	extracellular	46.93	52.21
Bra025397.1-P	Field mustard	extracellular	46.93	52.21
CDY04077	Canola	extracellular	45.85	51.63
CDY44393	Canola	extracellular	45.85	51.63
VIT_07s0005g04850.t01	Wine grape	extracellular	44.4	51.25
Bra033099.1-P	Field mustard	extracellular	45.49	51.22
Bra023523.1-P	Field mustard	cytosol	42.6	50.43
KRH44992	Soybean	extracellular	46.21	49.42
KRH01265	Soybean	extracellular	40.43	49.12
Solyc03g115310.1.1	Tomato	extracellular	45.13	48.26
CDX90986	Canola	extracellular	44.04	48.22
Solyc03g115270.1.1	Tomato	extracellular	44.77	47.88
Solyc03g115320.1.1	Tomato	extracellular	44.77	47.69
Solyc03g115350.1.1	Tomato	extracellular	44.4	47.67
CDX85546	Canola	extracellular	43.32	47.43
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	35.02	45.75
Zm00001d035101_P001	Maize	extracellular	35.02	45.75
Solyc03g115300.1.1	Tomato	extracellular	42.6	45.56
Zm00001d032882_P001	Maize	extracellular	42.24	45.53
CDY15952	Canola	extracellular	41.52	45.1
Bra030353.1-P	Field mustard	extracellular	41.52	45.1
AT5G39280.1	Thale cress	extracellular	44.77	45.09
GSMUA_Achr4P27910_001	Banana	extracellular	39.71	44.72
Zm00001d047353_P001	Maize	extracellular	41.52	44.57
AT5G39300.1	Thale cress	extracellular	44.4	44.57
CDY37873	Canola	extracellular	43.68	44.49
CDX74479	Canola	extracellular	43.68	44.49
GSMUA_Achr4P28010_001	Banana	extracellular	39.35	44.31
Bra028232.1-P	Field mustard	extracellular	43.32	44.12
AT5G39290.1	Thale cress	extracellular	44.4	44.09
GSMUA_Achr4P27950_001	Banana	extracellular	38.99	43.9
CDX99666	Canola	extracellular	42.6	43.87
AT5G39270.1	Thale cress	extracellular	44.04	43.73
Zm00001d035111_P001	Maize	extracellular	39.71	43.31
Zm00001d035108_P001	Maize	extracellular	39.71	43.31
Zm00001d035102_P001	Maize	extracellular	39.71	43.31
Zm00001d035100_P001	Maize	extracellular	39.71	42.97
Zm00001d040249_P001	Maize	extracellular	38.99	42.86
Zm00001d032885_P001	Maize	plastid	32.49	42.65
Zm00001d035109_P001	Maize	extracellular	38.99	42.52
Solyc03g115340.1.1	Tomato	mitochondrion	27.08	42.37
AT5G39260.1	Thale cress	extracellular	39.71	41.98
Zm00001d032886_P001	Maize	extracellular	37.55	41.27
Zm00001d032884_P001	Maize	extracellular	36.82	40.48
Zm00001d045571_P001	Maize	extracellular	39.35	40.07
Zm00001d040247_P001	Maize	extracellular	40.79	39.51
Zm00001d035112_P001	Maize	extracellular	28.88	39.22
AT5G39310.1	Thale cress	extracellular	43.32	38.46
Zm00001d006399_P001	Maize	extracellular	34.3	36.68
Zm00001d032883_P001	Maize	extracellular	37.55	35.49
PGSC0003DMT400063359	Potato	cytosol, plastid, vacuole	39.35	26.59
PGSC0003DMT400063363	Potato	extracellular	43.68	24.8

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6LEA6	ProteinID:AQK78299.1	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF33	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002212530	EnsemblPlantsGene:Zm00001d035083	EnsemblPlants:Zm00001d035083_P001
EnsemblPlants:Zm00001d035083_T001	SEG:seg	:	:	:	:

Description

expansin A24

Coordinates

chr6:-:4189141..4190124

Molecular Weight (calculated)

29591.5 Da

IEP (calculated)

5.807

GRAVY (calculated)

-0.157

Length

277 amino acids

Sequence
(BLAST)

001: MDTSASSSSS PPPSSFAAAV AALLLLLLLP ALSSGGDDWQ QWQDAHATFY GDETGAETMQ GACGYGDLFQ QGYGLETTAL SVALFNEGWS CGGCYEVRCQ
101: GSAYCASGSA VTVTATNLCP ANYSKPSGNW CNPPQRHFDL SKPMFLRLVT DFRVGIVPVR YRRVACGGRR GGVRFEMRGN RWWVAVLVFN VAGAGEVRAV
201: AARRDDDDSG GARQGQYYWA DMARSWGQVW TTGDGSWSVG QGLSFRVVAG DGRALVIDGA VPPGWAFGQS FEGKGQF

Best Arabidopsis Sequence Match ( AT5G39270.1 )
(BLAST)

001: MKLLEKMIYV EFLMIIMVIW VVPMSYGHGA MIGNAVEAPD VAEAPGINDP SKALDTNWYD ARATFYGDIH GGDTQQGACG YGNLFRQGYG LATAALSTAL
101: FNDGYTCGAC YEIMCTRDPQ WCLPGSVKIT ATNFCPANYS KTTDLWCNPP QKHFDLSLAM FLKIAKYKAG VVPVRYRRIP CSKTGGVKFE TKGNPYFLMV
201: LIYNVGGAGD IKYVQVKGNK TGWITMKKNW GQNWTTITVL TGQGLSFRVT TSDGITKDFW NVMPKNWGFG QTFDGRINF

Arabidopsis Description

EXPA22Expansin-A22 [Source:UniProtKB/Swiss-Prot;Acc:Q9FL80]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.