Factsheet for Zm00001d040247_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0248900-01	Rice	extracellular	68.53	78.09
TraesCS3A01G165900.1	Wheat	extracellular	66.43	76.92
TraesCS3D01G175800.1	Wheat	extracellular	67.13	76.49
TraesCS3B01G199900.1	Wheat	extracellular	65.38	74.5
GSMUA_Achr11P...	Banana	extracellular	59.79	68.4
Zm00001d040249_P001	Maize	extracellular	58.39	66.27
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	65.73	65.96
Zm00001d032885_P001	Maize	plastid	44.76	60.66
Zm00001d032886_P001	Maize	extracellular	53.15	60.32
Zm00001d032884_P001	Maize	extracellular	51.05	57.94
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	41.26	55.66
Zm00001d035101_P001	Maize	extracellular	40.91	55.19
Zm00001d032882_P001	Maize	extracellular	48.6	54.09
Zm00001d035111_P001	Maize	extracellular	47.2	53.15
Zm00001d035108_P001	Maize	extracellular	46.85	52.76
Zm00001d035102_P001	Maize	extracellular	46.85	52.76
Zm00001d035100_P001	Maize	extracellular	47.2	52.73
Zm00001d035109_P001	Maize	extracellular	46.5	52.36
Zm00001d047353_P001	Maize	extracellular	46.5	51.55
Zm00001d035112_P001	Maize	extracellular	36.01	50.49
Zm00001d032883_P001	Maize	extracellular	49.3	48.12
Solyc07g063210.2.1	Tomato	extracellular	42.31	47.27
VIT_19s0014g02910.t01	Wine grape	extracellular	41.26	45.91
AT3G15370.2	Thale cress	extracellular	42.31	42.91
Zm00001d045571_P001	Maize	extracellular	39.16	41.18
Zm00001d035083_P001	Maize	extracellular	39.51	40.79
Zm00001d006399_P001	Maize	extracellular	33.57	37.07
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	41.26	26.52

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6MPF4	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	ProteinID:ONM30929.1
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF36	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000842989B	EnsemblPlantsGene:Zm00001d040247	EnsemblPlants:Zm00001d040247_P001
EnsemblPlants:Zm00001d040247_T001	SEG:seg	:	:	:	:

Description

Putative expansin-A17

Coordinates

chr3:+:33681248..33682108

Molecular Weight (calculated)

30689.6 Da

IEP (calculated)

9.681

GRAVY (calculated)

0.083

Length

286 amino acids

Sequence
(BLAST)

001: MAKLHLLALC AFFFLLGGSV AAAQWTPAFA TFYGGSDASG TMGNCTFRFI TSLLLCYSHR PGFALKRTML TKLKWSGGAC GYGNLYDAGY GTRSTALSTA
101: LFNNGAMCGA CFAIACDAGR SQWCKPGAAS VTVTATNLCP PNWALPGDAG GWCNPPRRHF DMSQPAWEAI AVYRAGIVPV NYRRVPCRRA GGVRFTVQGR
201: SYFELVTVAN VGGSGVVAQA WVKGSATGWM AMSRNWGANW QSNAYLNGQG LSFRLRADDG RVVTAYNVAP AGWWFGATYT SNVQFY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.