Factsheet for Zm00001d006399_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG36242	Sorghum	extracellular	86.87	82.72
Os12t0546800-01	Rice	plasma membrane	69.11	61.72
KRH67777	Soybean	cytosol	29.34	47.8
Zm00001d040249_P001	Maize	extracellular	39.38	40.48
Zm00001d047353_P001	Maize	extracellular	38.22	38.37
Zm00001d035100_P001	Maize	extracellular	36.29	36.72
Zm00001d035102_P001	Maize	extracellular	35.91	36.61
Zm00001d035108_P001	Maize	extracellular	35.91	36.61
Zm00001d032886_P001	Maize	extracellular	35.52	36.51
Zm00001d035111_P001	Maize	extracellular	35.52	36.22
Zm00001d035109_P001	Maize	extracellular	35.52	36.22
Zm00001d032884_P001	Maize	extracellular	35.14	36.11
Zm00001d032885_P001	Maize	plastid	29.34	36.02
Zm00001d035101_P001	Maize	extracellular	29.34	35.85
Zm00001d032882_P001	Maize	extracellular	35.14	35.41
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	28.96	35.38
Zm00001d035112_P001	Maize	extracellular	27.41	34.8
Zm00001d035083_P001	Maize	extracellular	36.68	34.3
Zm00001d045571_P001	Maize	extracellular	35.52	33.82
Zm00001d040247_P001	Maize	extracellular	37.07	33.57
Zm00001d032883_P001	Maize	extracellular	34.75	30.72
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	16.22	28.77
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	15.44	26.85

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:B4FWR8	EMBL:BT041556	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
ProteinID:ONM23701.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF12	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI00017B80DB	EnsemblPlantsGene:Zm00001d006399	EnsemblPlants:Zm00001d006399_P001
EnsemblPlants:Zm00001d006399_T001	SEG:seg	:	:	:	:

Description

expansin A24

Coordinates

chr2:+:206593087..206593992

Molecular Weight (calculated)

28004.2 Da

IEP (calculated)

9.241

GRAVY (calculated)

-0.459

Length

259 amino acids

Sequence
(BLAST)

001: MSGRSWTIMA PLLASMLLVG LAVGSEEEED GGGKKKPHVN HGKFKAEPWT DGHATYYGGR DGLTDTTDGG ACGYKGELGK DYGTLTAAVG PSLYTNGTGC
101: GACYELKGPK GTVVVTATNE APPPVSGQKG EHFDLTIPAF LKIAEEKAGI VPITYRKVAC ERKGGIRYTI TGNQHYSEVK VTNVGGAGDV VALWVKGNKR
201: VKWTPMKRSW GQLWTTEVDL TGESLTFRVM TADHRKATSW HVTPRDWQFG KTYQATKNF

Best Arabidopsis Sequence Match ( AT2G39700.1 )
(BLAST)

001: MAIKLAILFT TFVLFSLADA RIPGIYSGGA WQNAHATFYG GSDASGTMGG ACGYGNLYSQ GYGTNTAALS TALFNNGMSC GACFELKCAN DPQWCHSGSP
101: SILITATNFC PPNLAQPSDN GGWCNPPREH FDLAMPVFLK IAQYRAGIVP VSYRRVPCRK RGGIRFTING HRYFNLVLIT NVAGAGDIVR ASVKGSRTGW
201: MSLSRNWGQN WQSNAVLVGQ ALSFRVTGSD RRTSTSWNMV PSNWQFGQTF VGKNFRV

Arabidopsis Description

EXPA4Expansin-A4 [Source:UniProtKB/Swiss-Prot;Acc:O48818]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.