Factsheet for Zm00001d032882_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94179	Sorghum	extracellular	85.99	87.35
Zm00001d032885_P001	Maize	plastid	65.76	80.09
Zm00001d032884_P001	Maize	extracellular	76.26	77.78
Zm00001d032886_P001	Maize	extracellular	75.88	77.38
Os03t0428700-01	Rice	extracellular	68.09	68.36
TraesCS1B01G156700.1	Wheat	extracellular	66.93	68.25
Zm00001d032883_P001	Maize	extracellular	76.65	67.24
Zm00001d035101_P001	Maize	extracellular	53.7	65.09
Os10t0439100-00	Rice	extracellular	64.2	64.71
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	52.92	64.15
Zm00001d035111_P001	Maize	extracellular	61.09	61.81
Zm00001d035102_P001	Maize	extracellular	60.7	61.42
Zm00001d035108_P001	Maize	extracellular	60.31	61.02
Zm00001d035100_P001	Maize	extracellular	60.7	60.94
Zm00001d035109_P001	Maize	extracellular	59.53	60.24
CDY66063	Canola	cytosol, extracellular, plastid	37.35	58.18
Zm00001d035112_P001	Maize	extracellular	45.14	56.86
Zm00001d040249_P001	Maize	extracellular	53.7	54.76
KRH51669	Soybean	extracellular	52.53	53.57
Bra016473.1-P	Field mustard	extracellular	33.85	51.18
Zm00001d040247_P001	Maize	extracellular	54.09	48.6
Zm00001d047353_P001	Maize	extracellular	47.08	46.9
VIT_19s0014g02910.t01	Wine grape	extracellular	45.14	45.14
Solyc07g063210.2.1	Tomato	extracellular	44.75	44.92
Zm00001d035083_P001	Maize	extracellular	45.53	42.24
AT3G15370.2	Thale cress	extracellular	45.91	41.84
Zm00001d045571_P001	Maize	extracellular	40.47	38.24
Zm00001d006399_P001	Maize	extracellular	35.41	35.14
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	44.75	25.84

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6KUP3	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	ProteinID:ONM06283.1
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF14	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000842ABD6	EnsemblPlantsGene:Zm00001d032882	EnsemblPlants:Zm00001d032882_P001	EnsemblPlants:Zm00001d032882_T001
SEG:seg	:	:	:	:	:

Description

Expansin-A11

Coordinates

chr1:-:241341946..241343005

Molecular Weight (calculated)

26838.7 Da

IEP (calculated)

8.238

GRAVY (calculated)

0.057

Length

257 amino acids

Sequence
(BLAST)

001: MYMDTSSRSL VLCTLVLAAC HGLAAAGWSQ GTATFYGDAD GSGTMGGACG YGNLYNAGYG INNAALSQTL FNDGASCGQC YLITCDASRP GGQYCRPGSN
101: SVTVSATNLC PPNYGLPGGG WCGPGRPHFD MSQPAWERVG VVQGGIVPVL YQQVACARRG GVRFAIAGSA YYLLVNIQNV GGSGSVKAAS VKGDRTAGWV
201: QMSRNWGANW QALSGLVGQG LSFAVTTTGG QYLQFLYVVP GWWQFGMTFA TNQNFAY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.