Factsheet for Zm00001d032884_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032885_P001	Maize	plastid	81.75	97.63
EER91570	Sorghum	extracellular	92.06	92.43
Zm00001d032886_P001	Maize	extracellular	76.59	76.59
Zm00001d032882_P001	Maize	extracellular	77.78	76.26
Zm00001d032883_P001	Maize	extracellular	86.51	74.4
TraesCS1B01G156700.1	Wheat	extracellular	68.65	68.65
Os03t0428700-01	Rice	extracellular	69.05	67.97
Zm00001d035101_P001	Maize	extracellular	56.75	67.45
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	55.95	66.51
Zm00001d035111_P001	Maize	extracellular	65.48	64.96
Os10t0439100-00	Rice	extracellular	65.08	64.31
Zm00001d035102_P001	Maize	extracellular	64.68	64.17
Zm00001d035108_P001	Maize	extracellular	64.29	63.78
Zm00001d035109_P001	Maize	extracellular	63.89	63.39
Zm00001d035100_P001	Maize	extracellular	63.89	62.89
Zm00001d035112_P001	Maize	extracellular	49.21	60.78
CDY66063	Canola	cytosol, extracellular, plastid	36.9	56.36
Zm00001d040249_P001	Maize	extracellular	55.56	55.56
Zm00001d040247_P001	Maize	extracellular	57.94	51.05
KRH51669	Soybean	extracellular	49.6	49.6
Bra016473.1-P	Field mustard	extracellular	32.94	48.82
Zm00001d047353_P001	Maize	extracellular	49.6	48.45
Solyc07g063210.2.1	Tomato	extracellular	44.84	44.14
VIT_19s0014g02910.t01	Wine grape	extracellular	43.65	42.8
AT3G15370.2	Thale cress	extracellular	45.24	40.43
Zm00001d045571_P001	Maize	extracellular	41.27	38.24
Zm00001d035083_P001	Maize	extracellular	40.48	36.82
Zm00001d006399_P001	Maize	extracellular	36.11	35.14
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	44.84	25.39

Protein Annotations

EntrezGene:103643530	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6KUP5	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
ProteinID:ONM06285.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF14	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00022152C2	EnsemblPlantsGene:Zm00001d032884
EnsemblPlants:Zm00001d032884_P001	EnsemblPlants:Zm00001d032884_T001	SEG:seg	:	:	:

Description

Expansin-A11

Coordinates

chr1:+:241404608..241405864

Molecular Weight (calculated)

26499.2 Da

IEP (calculated)

8.300

GRAVY (calculated)

0.016

Length

252 amino acids

Sequence
(BLAST)

001: MKMNMSLVLR VAFSACLASL AAAGWSPGTA TFYGGADGSG TMGGACGYDN LYNAGYGVNN AALSATLFND GASCGQCYLI ACDTSRPGGQ SCKPGSSITV
101: SATNLCPANY ALPNGGWCGP GRPHFDMSQP AWEHIGIYGA GVIPVLYQQV KCSRTGGVRF SLAGSQYFLL VNVQNLGGSG SVGAAWVKGD RTNWIQMSRN
201: WGANWQALAG LVGQGLSFAV TTTGGQYIQF WNVAPGWWQF GQTYTTTQNF YY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.