Factsheet for Zm00001d040249_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES02419	Sorghum	extracellular	92.46	92.09
EES02683	Sorghum	extracellular	91.67	90.94
Os01t0249100-00	Rice	extracellular	65.87	76.15
TraesCS3D01G176000.1	Wheat	extracellular	72.22	71.37
TraesCS3A01G165600.1	Wheat	extracellular	71.83	70.98
TraesCS3B01G200100.1	Wheat	extracellular	70.63	69.8
GSMUA_Achr11P...	Banana	extracellular	62.3	62.8
Zm00001d032886_P001	Maize	extracellular	59.52	59.52
Zm00001d040247_P001	Maize	extracellular	66.27	58.39
Zm00001d032885_P001	Maize	plastid	48.41	57.82
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	47.62	56.6
Zm00001d035101_P001	Maize	extracellular	46.83	55.66
Zm00001d032884_P001	Maize	extracellular	55.56	55.56
Zm00001d035100_P001	Maize	extracellular	55.56	54.69
Zm00001d035102_P001	Maize	extracellular	54.76	54.33
Zm00001d035108_P001	Maize	extracellular	54.76	54.33
Zm00001d035109_P001	Maize	extracellular	54.37	53.94
Zm00001d035111_P001	Maize	extracellular	54.37	53.94
Zm00001d032882_P001	Maize	extracellular	54.76	53.7
Zm00001d035112_P001	Maize	extracellular	40.48	50.0
Zm00001d047353_P001	Maize	extracellular	50.0	48.84
Zm00001d032883_P001	Maize	extracellular	55.95	48.12
Solyc07g063210.2.1	Tomato	extracellular	44.84	44.14
VIT_19s0014g02910.t01	Wine grape	extracellular	43.25	42.41
AT3G15370.2	Thale cress	extracellular	46.03	41.13
Zm00001d006399_P001	Maize	extracellular	40.48	39.38
Zm00001d035083_P001	Maize	extracellular	42.86	38.99
Zm00001d045571_P001	Maize	extracellular	40.08	37.13
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	44.44	25.17

Protein Annotations

EntrezGene:103649941	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A1D6MPF6	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
ProteinID:ONM30931.1	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF15	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	UniParc:UPI000221D29D	EnsemblPlantsGene:Zm00001d040249	EnsemblPlants:Zm00001d040249_P001
EnsemblPlants:Zm00001d040249_T001	SEG:seg	:	:	:	:

Description

Putative expansin-A17

Coordinates

chr3:-:33801129..33802069

Molecular Weight (calculated)

26691.2 Da

IEP (calculated)

4.806

GRAVY (calculated)

-0.023

Length

252 amino acids

Sequence
(BLAST)

001: MEKALLLLLL SLCASLSLLD GAVAQQYWTP ATATFYGGSD ASGTMGGSCG YGDLYSAGYG TQTTALSTAL YGDGASCGAC YLVTCDASRT QYCKPGSPSV
101: AVTATNFCPP NYGDADGWCN SPRQHFDMSQ PAWETIGLYQ AGIIPVNYRR VPCQRSGGIR FGISGHDYFE LVTITNVGGA GAVAAAWVMG TGTDWLTMSR
201: NWGENWQSGA YLTGKALSFK VQTDDGKVVV AYNVAPANWQ FGSTYQASVN FY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.