Factsheet for TraesCS3B01G200100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G176000.1	Wheat	extracellular	96.86	96.86
TraesCS3A01G165600.1	Wheat	extracellular	96.86	96.86
Os01t0249100-00	Rice	extracellular	61.96	72.48
EES02419	Sorghum	extracellular	70.2	70.75
Zm00001d040249_P001	Maize	extracellular	69.8	70.63
EES02683	Sorghum	extracellular	69.8	70.08
TraesCS3B01G348000.1	Wheat	extracellular	66.67	68.27
TraesCS3B01G347900.1	Wheat	extracellular	65.49	67.07
GSMUA_Achr11P...	Banana	extracellular	65.1	66.4
TraesCS3B01G199900.1	Wheat	extracellular	64.71	65.74
TraesCS5B01G548500.1	Wheat	extracellular	64.31	64.31
TraesCS1B01G156700.1	Wheat	extracellular	58.04	58.73
TraesCS4B01G272800.1	Wheat	extracellular	54.9	55.34
TraesCS5B01G528500.1	Wheat	extracellular	54.9	55.12
TraesCS5B01G528700.1	Wheat	extracellular	55.29	55.08
TraesCS4B01G272700.1	Wheat	extracellular	54.51	54.94
TraesCS4B01G272600.1	Wheat	extracellular	54.12	54.55
TraesCS4B01G271300.1	Wheat	extracellular	52.94	53.15
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	36.08	52.87
Solyc07g063210.2.1	Tomato	extracellular	46.67	46.48
TraesCS1B01G214300.1	Wheat	extracellular	45.1	44.06
VIT_19s0014g02910.t01	Wine grape	extracellular	44.31	43.97
TraesCS1B01G214200.1	Wheat	extracellular	44.71	43.68
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	42.35	43.55
TraesCS5B01G528400.1	Wheat	extracellular	28.24	41.38
AT3G15370.2	Thale cress	extracellular	45.1	40.78
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	47.45	27.19
TraesCS7B01G293800.1	Wheat	extracellular	20.78	26.37

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF15	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3B01G200100	EnsemblPlants:TraesCS3B01G200100.1	SEG:seg	:

Description

No Description!

Coordinates

chr3B:-:228750084..228750992

Molecular Weight (calculated)

27282.5 Da

IEP (calculated)

6.861

GRAVY (calculated)

-0.272

Length

255 amino acids

Sequence
(BLAST)

001: MENHLAILAL FLGVCMSQLG GSPAQQYWTP ANATFYGGGD ASGTMGGSCG YGNLYDAGYG TNSTALSATL YGDGKSCGAC YVITCDAYHT QSCKPGTSIT
101: VTATNFCPPN WSQPSDNGGW CNPPRQHFDM SQPAWETIAV YQAGFVPIKY ARTACPRRNG GIRFSITGHD YFDLVLISNV GGSGAVSAAS VKGSNTDWMP
201: MSRNWGSNWQ SNGYLTGQSL SFRVQTDDGR SVTAYNVAPA YWKFGDTYTS SVNFY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.