Factsheet for TraesCS5B01G528400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G528500.1	Wheat	extracellular	59.77	40.94
CDY66063	Canola	cytosol, extracellular, plastid	37.93	40.0
TraesCS5B01G528700.1	Wheat	extracellular	58.62	39.84
Bra016473.1-P	Field mustard	extracellular	37.93	38.82
TraesCS4B01G272800.1	Wheat	extracellular	53.45	36.76
TraesCS4B01G272700.1	Wheat	extracellular	53.45	36.76
TraesCS4B01G271300.1	Wheat	extracellular	53.45	36.61
TraesCS4B01G272600.1	Wheat	extracellular	52.3	35.97
TraesCS5B01G548500.1	Wheat	extracellular	49.43	33.73
TraesCS3B01G347900.1	Wheat	extracellular	47.7	33.33
TraesCS1B01G156700.1	Wheat	extracellular	47.7	32.94
TraesCS3B01G348000.1	Wheat	extracellular	46.55	32.53
TraesCS3B01G199900.1	Wheat	extracellular	46.55	32.27
Os03t0156000-00	Rice	extracellular	45.98	32.13
Os03t0155900-01	Rice	extracellular	44.83	31.33
Os03t0156300-00	Rice	extracellular	41.38	30.0
TraesCS3B01G200100.1	Wheat	extracellular	41.38	28.24
KRH51669	Soybean	extracellular	40.23	27.78
TraesCS7B01G293800.1	Wheat	extracellular	28.16	24.38
Solyc07g063210.2.1	Tomato	extracellular	35.06	23.83
TraesCS1B01G214300.1	Wheat	extracellular	35.63	23.75
TraesCS1B01G214200.1	Wheat	extracellular	35.06	23.37
TraesCS7B01G218200.1	Wheat	cytosol, extracellular, plastid	32.76	22.98
VIT_19s0014g02910.t01	Wine grape	extracellular	33.91	22.96
AT3G15370.2	Thale cress	extracellular	33.91	20.92
TraesCS5B01G528600.1	Wheat	extracellular, plastid, vacuole	17.82	17.82
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	35.06	13.71

Protein Annotations

Gene3D:2.40.40.10	MapMan:35.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	GO:GO:0005575
GO:GO:0005576	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112
InterPro:IPR036908	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PANTHER:PTHR31867
PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF50685	SignalP:SignalP-noTM
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS5B01G528400	EnsemblPlants:TraesCS5B01G528400.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr5B:+:687212774..687213395

Molecular Weight (calculated)

17940.1 Da

IEP (calculated)

8.319

GRAVY (calculated)

0.097

Length

174 amino acids

Sequence
(BLAST)

001: MVAGMRFLQL FAVVLAFSFV PAKFGYWLPA HATFYGGADG SDTMGGACGY ENLYNAGYGI NNAALSTALF NNGLSCGQCY LITCDTSKSN MCKPGTSITV
101: SATNFCPPNW ALPATTEAGA TLHVSTSTCP SPPGRTSPST APASSPSFTS RSRARGRAAC ASPLTASTTL SSCW

Best Arabidopsis Sequence Match ( AT4G01630.1 )
(BLAST)

001: MTKIFSLLVA MIFSTMFFMK ISSVSAGWLQ AHATFYGGSD ASGTMGGACG YGNLYTDGYK TNTAALSTAL FNDGKSCGGC YQILCDATKV PQWCLKGKSI
101: TITATNFCPP NFAQASDNGG WCNPPRPHFD MAQPAFLTIA KYKAGIVPIL YKKVGCRRSG GMRFTINGRN YFELVLISNV AGGGEISKVW IKGSKSNKWE
201: TMSRNWGANY QSNTYLNGQS LSFKVQLSDG SIKAALNVVP SNWRFGQSFK SNVNF

Arabidopsis Description

EXPA17EXPA17 [Source:UniProtKB/TrEMBL;Acc:A0A178UWZ2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.