Factsheet for Os03t0156300-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0156000-00	Rice	extracellular	96.67	93.17
Os03t0155900-01	Rice	extracellular	88.75	85.54
TraesCS4D01G271800.1	Wheat	extracellular	72.08	69.48
HORVU4Hr1G072660.1	Barley	extracellular	72.92	69.17
TraesCS4A01G032600.1	Wheat	extracellular	72.92	69.17
TraesCS4A01G345100.1	Wheat	extracellular	64.58	68.89
TraesCS4D01G271900.1	Wheat	extracellular	72.5	68.77
TraesCS4D01G271700.1	Wheat	extracellular	71.25	67.59
Os03t0428700-01	Rice	extracellular	72.08	67.58
TraesCS4A01G345000.1	Wheat	extracellular	70.83	66.93
TraesCS1A01G406900.1	Wheat	extracellular	70.83	66.93
TraesCS5D01G527700.1	Wheat	extracellular	70.83	66.67
HORVU5Hr1G119860.2	Barley	extracellular	70.42	66.54
Zm00001d035101_P001	Maize	extracellular	58.75	66.51
Zm00001d035111_P001	Maize	extracellular	70.0	66.14
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	58.33	66.04
TraesCS1A01G406800.1	Wheat	extracellular	70.42	66.02
Os10t0439100-00	Rice	extracellular	70.0	65.88
Zm00001d035102_P001	Maize	extracellular	69.58	65.75
Zm00001d035108_P001	Maize	extracellular	69.58	65.75
TraesCS5D01G527800.1	Wheat	extracellular	69.58	65.23
Zm00001d035100_P001	Maize	extracellular	69.58	65.23
Zm00001d035109_P001	Maize	extracellular	68.75	64.96
TraesCS4D01G270500.1	Wheat	extracellular	68.75	64.96
TraesCS4A01G034200.1	Wheat	extracellular	68.75	64.96
HORVU4Hr1G072440.1	Barley	extracellular	68.33	64.57
EES13271	Sorghum	extracellular	69.17	64.09
EES13270	Sorghum	extracellular	68.75	63.46
Zm00001d035112_P001	Maize	extracellular	52.92	62.25
HORVU4Hr1G072580.1	Barley	extracellular	70.83	61.82
HORVU5Hr1G119670.1	Barley	extracellular	71.25	60.85
HORVU5Hr1G119680.4	Barley	extracellular	70.42	59.72
EES14433	Sorghum	plastid	69.17	59.71
Os06t0718100-01	Rice	plastid	59.17	53.99
KRH51669	Soybean	extracellular	56.67	53.97
Os01t0248900-01	Rice	extracellular	56.25	53.78
Os01t0249100-00	Rice	extracellular	48.75	53.67
Os05t0276500-01	Rice	extracellular	56.25	52.94
CDY66063	Canola	cytosol, extracellular, plastid	36.25	52.73
Os05t0277000-00	Rice	extracellular	51.67	50.0
Bra016473.1-P	Field mustard	extracellular	32.08	45.29
Os10t0535900-00	Rice	extracellular	48.75	43.98
Solyc07g063210.2.1	Tomato	extracellular	46.25	43.36
TraesCS5B01G528400.1	Wheat	extracellular	30.0	41.38
AT3G15370.2	Thale cress	extracellular	46.67	39.72
VIT_19s0014g02910.t01	Wine grape	extracellular	42.08	39.3
Os06t0108600-00	Rice	extracellular	39.58	35.45
Os12t0546800-01	Rice	plasma membrane	35.0	28.97
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	46.25	24.94

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EntrezGene:4331668	ProteinID:AAL24491.1	ProteinID:AAM51839.1
ProteinID:ABF94057.1	ProteinID:BAF10922.1	ProteinID:BAS82365.1	EMBL:DQ061061	ProteinID:EEE58344.1	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020
GO:GO:0016043	GO:GO:0030312	GO:GO:0071555	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	EnsemblPlantsGene:Os03g0156300	EnsemblPlants:Os03t0156300-00	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225
PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	UniProt:Q10RK1
InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM
UniParc:UPI0000DB486E	RefSeq:XP_015630094.1	SEG:seg	:	:	:

Description

ALPHA-EXPANSIN 20Alpha-expansin OsEXPA20. (Os03t0156300-00)

Coordinates

chr3:+:3036386..3037894

Molecular Weight (calculated)

25790.7 Da

IEP (calculated)

5.775

GRAVY (calculated)

0.145

Length

240 amino acids

Sequence
(BLAST)

001: MGNILLQLLA VVALCIAPAR SDWLPGTATF YGGADGSGTM GGACGYGNLY DQRYGINNAA LSTPLFNDGA SCGQCYLIIC DYGKAPDWCK LGKAITVTGT
101: NYGGWCNATR PYFDMSQPAW ENIGIYSAGI VPILYQQVKC WRYGGVRFII NGFNYFELVL VTNMAGSGSI VSMSVKGSCT GWIQMTRNWG ANWQCLAGLA
201: GQALSFNVTS TGGQTIVFDD AVPAGWSFGQ TFSTYHQFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.