Factsheet for HORVU4Hr1G072580.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	extracellular, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G072660.1	Barley	extracellular	90.18	98.02
TraesCS4A01G032600.1	Wheat	extracellular	89.09	96.84
TraesCS4B01G272800.1	Wheat	extracellular	89.09	96.84
TraesCS4D01G271700.1	Wheat	extracellular	89.09	96.84
TraesCS4D01G271900.1	Wheat	extracellular	89.09	96.84
TraesCS4B01G272600.1	Wheat	extracellular	88.0	95.65
TraesCS4B01G272700.1	Wheat	extracellular	87.27	94.86
TraesCS4D01G271800.1	Wheat	extracellular	85.45	94.38
HORVU5Hr1G119860.2	Barley	extracellular	78.18	84.65
HORVU5Hr1G119670.1	Barley	extracellular	83.27	81.49
HORVU5Hr1G119680.4	Barley	extracellular	81.45	79.15
HORVU4Hr1G072440.1	Barley	extracellular	72.0	77.95
Zm00001d035101_P001	Maize	extracellular	57.82	75.0
Zm00001d035104_P001	Maize	cytosol, extracellular, plastid	57.82	75.0
Os03t0156000-00	Rice	extracellular	66.55	73.49
Zm00001d035111_P001	Maize	extracellular	67.64	73.23
Zm00001d035108_P001	Maize	extracellular	66.91	72.44
Zm00001d035100_P001	Maize	extracellular	67.27	72.27
Zm00001d035102_P001	Maize	extracellular	66.55	72.05
EES13271	Sorghum	extracellular	67.64	71.81
Zm00001d035109_P001	Maize	extracellular	66.18	71.65
EES13270	Sorghum	extracellular	67.64	71.54
Os03t0155900-01	Rice	extracellular	64.36	71.08
Os03t0156300-00	Rice	extracellular	61.82	70.83
Zm00001d035112_P001	Maize	extracellular	52.36	70.59
EES14433	Sorghum	plastid	67.64	66.91
HORVU3Hr1G076670.1	Barley	extracellular	55.64	61.45
HORVU3Hr1G076620.1	Barley	extracellular	55.64	61.45
HORVU3Hr1G076640.2	Barley	extracellular	55.27	61.04
CDY66063	Canola	cytosol, extracellular, plastid	36.36	60.61
HORVU5Hr1G121370.1	Barley	extracellular	56.0	60.39
KRH51669	Soybean	extracellular	53.09	57.94
HORVU3Hr1G076630.1	Barley	extracellular	42.55	52.47
Bra016473.1-P	Field mustard	extracellular	32.36	52.35
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	54.18	52.28
HORVU0Hr1G032890.2	Barley	extracellular	34.91	47.06
Solyc07g063210.2.1	Tomato	extracellular	42.18	45.31
HORVU1Hr1G036910.1	Barley	extracellular	19.64	43.9
VIT_19s0014g02910.t01	Wine grape	extracellular	40.36	43.19
HORVU7Hr1G075680.1	Barley	extracellular	40.0	42.64
AT3G15370.2	Thale cress	extracellular	43.27	42.2
HORVU1Hr1G051620.1	Barley	extracellular, mitochondrion	21.82	41.1
HORVU1Hr1G051640.1	Barley	extracellular, mitochondrion	21.82	40.27
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	35.27	29.13
HORVU1Hr1G069830.7	Barley	cytosol, nucleus	30.18	27.67
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	41.82	25.84
HORVU1Hr1G051590.1	Barley	plastid	18.18	16.67

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	UniProt:A0A287PM28	InterPro:Expan_Lol_pI	InterPro:Expansin
InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043
GO:GO:0030312	EnsemblPlantsGene:HORVU4Hr1G072580	EnsemblPlants:HORVU4Hr1G072580.1	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749
InterPro:IPR036908	PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842
PFscan:PS50843	PANTHER:PTHR31867	PANTHER:PTHR31867:SF40	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	UniParc:UPI000B488355	SEG:seg	:	:

Description

No Description!

Coordinates

chrchr4H:+:586053285..586054726

Molecular Weight (calculated)

29942.6 Da

IEP (calculated)

8.285

GRAVY (calculated)

0.015

Length

275 amino acids

Sequence
(BLAST)

001: IATISSKLAS CGRRSTISPC RKMAAGMRFL QLFATVLGFC FAPVKSNWIP ATATFYGGAD GSDTMGGACG YENLYNAGYG INNVALSTAL FNDGASCGQC
101: YVIICDTSKS DMCKPGTSIT VSATNFCPPN WDLPSDNGGW CNPPRHHFDM SQPAWENIGI YRAGIIPVFY QQVKCWRQGG VRFTINGFNY FELVLVANIG
201: GSGSVKSMSV KGTNTAWIPM SRNWGANWHC LSGLVGQALS FAITSTGGQY LVFQDVVPAW WQFGQTFTTW RQFDY

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.