Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
Predictors | GFP | MS/MS | Papers | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
HORVU1Hr1G051620.1 | Barley | extracellular, mitochondrion | 85.23 | 86.99 |
HORVU0Hr1G032890.2 | Barley | extracellular | 39.6 | 28.92 |
HORVU1Hr1G036910.1 | Barley | extracellular | 23.49 | 28.46 |
HORVU4Hr1G072440.1 | Barley | extracellular | 41.61 | 24.41 |
HORVU5Hr1G121370.1 | Barley | extracellular | 40.94 | 23.92 |
HORVU3Hr1G076620.1 | Barley | extracellular | 39.6 | 23.69 |
HORVU3Hr1G076640.2 | Barley | extracellular | 39.6 | 23.69 |
HORVU5Hr1G119860.2 | Barley | extracellular | 39.6 | 23.23 |
HORVU3Hr1G076670.1 | Barley | extracellular | 38.26 | 22.89 |
HORVU4Hr1G072660.1 | Barley | extracellular | 38.26 | 22.53 |
HORVU4Hr1G072580.1 | Barley | extracellular | 40.27 | 21.82 |
HORVU5Hr1G119670.1 | Barley | extracellular | 40.94 | 21.71 |
HORVU7Hr1G075680.1 | Barley | extracellular | 37.58 | 21.71 |
HORVU3Hr1G034030.1 | Barley | extracellular, plasma membrane, plastid | 40.27 | 21.05 |
HORVU5Hr1G119680.4 | Barley | extracellular | 39.6 | 20.85 |
KRH67777 | Soybean | cytosol | 20.81 | 19.5 |
HORVU3Hr1G076630.1 | Barley | extracellular | 28.86 | 19.28 |
HORVU7Hr1G002440.2 | Barley | extracellular, vacuole | 41.61 | 18.62 |
Os12t0546800-01 | Rice | plasma membrane | 30.2 | 15.52 |
Zm00001d006399_P001 | Maize | extracellular | 26.85 | 15.44 |
KXG36242 | Sorghum | extracellular | 28.19 | 15.44 |
HORVU1Hr1G069830.7 | Barley | cytosol, nucleus | 27.52 | 13.67 |
HORVU1Hr1G051590.1 | Barley | plastid | 23.49 | 11.67 |
Protein Annotations
Gene3D:2.40.40.10 | MapMan:35.1 | UniProt:A0A287FK01 | InterPro:Expan_Lol_pI | InterPro:Expansin | InterPro:Expansin/allergen_DPBB_dom |
GO:GO:0005575 | GO:GO:0005576 | GO:GO:0008150 | GO:GO:0009664 | GO:GO:0009987 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0016043 | EnsemblPlantsGene:HORVU1Hr1G051640 | EnsemblPlants:HORVU1Hr1G051640.1 | InterPro:IPR007112 | InterPro:IPR036908 |
PFAM:PF03330 | PRINTS:PR01225 | PRINTS:PR01226 | PFscan:PS50842 | PANTHER:PTHR31867 | PANTHER:PTHR31867:SF2 |
InterPro:RlpA-like_DPBB | InterPro:RlpA-like_sf | SMART:SM00837 | SUPFAM:SSF50685 | TMHMM:TMhelix | UniParc:UPI000B47A9FF |
SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:382728504..382729343
Molecular Weight (calculated)
15720.5 Da
IEP (calculated)
7.906
GRAVY (calculated)
-0.136
Length
149 amino acids
Sequence
(BLAST)
(BLAST)
001: ELSQQKSTTR QNRSEGNGFC RVKSAAVLVL LVCLAGVVTI ADARFRAMQW TPAHATFYGD EATAETMGGA CGYDITAGYG ADTAALSSTL FQEGYGCGTC
101: YQIRCVKAAA CYRGSPVITV TATNLCPPNW AQDTNNGGWC NPPRXANFK
101: YQIRCVKAAA CYRGSPVITV TATNLCPPNW AQDTNNGGWC NPPRXANFK
001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
Arabidopsis Description
EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.