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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, extracellular

Predictor Summary:
  • mitochondrion 2
  • extracellular 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
HORVU1Hr1G051620.1 Barley extracellular, mitochondrion 85.23 86.99
HORVU0Hr1G032890.2 Barley extracellular 39.6 28.92
HORVU1Hr1G036910.1 Barley extracellular 23.49 28.46
HORVU4Hr1G072440.1 Barley extracellular 41.61 24.41
HORVU5Hr1G121370.1 Barley extracellular 40.94 23.92
HORVU3Hr1G076620.1 Barley extracellular 39.6 23.69
HORVU3Hr1G076640.2 Barley extracellular 39.6 23.69
HORVU5Hr1G119860.2 Barley extracellular 39.6 23.23
HORVU3Hr1G076670.1 Barley extracellular 38.26 22.89
HORVU4Hr1G072660.1 Barley extracellular 38.26 22.53
HORVU4Hr1G072580.1 Barley extracellular 40.27 21.82
HORVU5Hr1G119670.1 Barley extracellular 40.94 21.71
HORVU7Hr1G075680.1 Barley extracellular 37.58 21.71
HORVU3Hr1G034030.1 Barley extracellular, plasma membrane, plastid 40.27 21.05
HORVU5Hr1G119680.4 Barley extracellular 39.6 20.85
KRH67777 Soybean cytosol 20.81 19.5
HORVU3Hr1G076630.1 Barley extracellular 28.86 19.28
HORVU7Hr1G002440.2 Barley extracellular, vacuole 41.61 18.62
Os12t0546800-01 Rice plasma membrane 30.2 15.52
Zm00001d006399_P001 Maize extracellular 26.85 15.44
KXG36242 Sorghum extracellular 28.19 15.44
HORVU1Hr1G069830.7 Barley cytosol, nucleus 27.52 13.67
HORVU1Hr1G051590.1 Barley plastid 23.49 11.67
Protein Annotations
Gene3D:2.40.40.10MapMan:35.1UniProt:A0A287FK01InterPro:Expan_Lol_pIInterPro:ExpansinInterPro:Expansin/allergen_DPBB_dom
GO:GO:0005575GO:GO:0005576GO:GO:0008150GO:GO:0009664GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016043EnsemblPlantsGene:HORVU1Hr1G051640EnsemblPlants:HORVU1Hr1G051640.1InterPro:IPR007112InterPro:IPR036908
PFAM:PF03330PRINTS:PR01225PRINTS:PR01226PFscan:PS50842PANTHER:PTHR31867PANTHER:PTHR31867:SF2
InterPro:RlpA-like_DPBBInterPro:RlpA-like_sfSMART:SM00837SUPFAM:SSF50685TMHMM:TMhelixUniParc:UPI000B47A9FF
SEG:seg:::::
Description
No Description!
Coordinates
chrchr1H:-:382728504..382729343
Molecular Weight (calculated)
15720.5 Da
IEP (calculated)
7.906
GRAVY (calculated)
-0.136
Length
149 amino acids
Sequence
(BLAST)
001: ELSQQKSTTR QNRSEGNGFC RVKSAAVLVL LVCLAGVVTI ADARFRAMQW TPAHATFYGD EATAETMGGA CGYDITAGYG ADTAALSSTL FQEGYGCGTC
101: YQIRCVKAAA CYRGSPVITV TATNLCPPNW AQDTNNGGWC NPPRXANFK
Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)
001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR
Arabidopsis Description
EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.