Factsheet for Os05t0276500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	mitochondrion
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0277000-00	Rice	extracellular	74.51	76.61
Os01t0248900-01	Rice	extracellular	71.37	72.51
GSMUA_Achr11P...	Banana	extracellular	64.31	65.6
Os01t0249100-00	Rice	extracellular	55.69	65.14
Os10t0439100-00	Rice	extracellular	63.14	63.14
Os03t0428700-01	Rice	extracellular	63.14	62.89
Os03t0155900-01	Rice	extracellular	56.47	57.83
Os03t0156000-00	Rice	extracellular	56.47	57.83
Os03t0156300-00	Rice	extracellular	52.94	56.25
Os06t0718100-01	Rice	plastid	57.65	55.89
Os10t0535900-00	Rice	extracellular	49.41	47.37
Solyc07g063210.2.1	Tomato	extracellular	47.45	47.27
VIT_19s0014g02910.t01	Wine grape	extracellular	46.27	45.91
AT3G15370.2	Thale cress	extracellular	47.06	42.55
Os06t0108600-00	Rice	extracellular	40.0	38.06
Os12t0546800-01	Rice	plasma membrane	39.22	34.48
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	47.45	27.19

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EntrezGene:4338278	EMBL:AC130731	EMBL:AK060313
ProteinID:BAF16991.1	ProteinID:BAS93116.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD
InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150
GO:GO:0009664	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	GO:GO:0071555
InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908	EnsemblPlantsGene:Os05g0276500	EnsemblPlants:Os05t0276500-01
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF32	UniProt:Q40637	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837
SUPFAM:SSF49590	SUPFAM:SSF50685	SignalP:SignalP-noTM	EMBL:U30479	UniParc:UPI0000E123E8	RefSeq:XP_015638086.1
SEG:seg	:	:	:	:	:

Description

ALPHA-EXPANSIN 3Expansin Os-EXPA3. (Os05t0276500-01)

Coordinates

chr5:-:11393115..11394895

Molecular Weight (calculated)

27306.4 Da

IEP (calculated)

8.395

GRAVY (calculated)

-0.021

Length

255 amino acids

Sequence
(BLAST)

001: MLSGMEKQPA MLLVLVTLCA FACKRSVAQS AFATFYGGKD GSGTMGGACG YGNLYNAGYG LYNAALSSAL FNDGAMCGAC YTITCDTSQT KWCKPGGNSI
101: TITATNLCPP NWALPSNSGG WCNPPRQHFD MSQPAWENIA VYQAGIVPVN YKRVPCQRSG GIRFAISGHD YFELVTVTNV GGSGVVAQMS IKGSNTGWMA
201: MSRNWGANWQ SNAYLAGQSL SFIVQLDDGR KVTAWNVAPS NWFFGATYST SWVQF

Best Arabidopsis Sequence Match ( AT1G20190.1 )
(BLAST)

001: MSKSLAGLAV LAALFIAVDA FRPSGLTNGH ATFYGGSDAS GTMGGACGYG DLYSAGYGTM TAALSTALFN DGASCGECYR ITCDHAADSR WCLKGASVVI
101: TATNFCPPNF ALPNNNGGWC NPPLKHFDMA QPAWEKIGIY RGGIVPVVFQ RVSCYKKGGV RFRINGRDYF ELVNIQNVGG AGSIKSVSIK GSKTGWLAMS
201: RNWGANWQSN AYLDGQALSF SITTTDGATR VFLNVVPSSW SFGQIYSSNV QF

Arabidopsis Description

EXPA11Expansin-A11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNU3]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.