Factsheet for TraesCS3A01G165900.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

mitochondrion 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G199900.1	Wheat	extracellular	97.57	96.02
TraesCS3D01G175800.1	Wheat	extracellular	96.76	95.22
HORVU3Hr1G034030.1	Barley	extracellular, plasma membrane, plastid	96.76	83.86
Os01t0248900-01	Rice	extracellular	83.81	82.47
TraesCS3A01G317900.1	Wheat	extracellular	75.3	74.7
TraesCS3A01G318000.1	Wheat	extracellular	74.9	74.3
TraesCS3A01G318100.1	Wheat	extracellular	74.49	73.9
GSMUA_Achr11P...	Banana	extracellular	70.85	70.0
TraesCS4A01G339200.1	Wheat	extracellular	70.45	68.24
Zm00001d040247_P001	Maize	extracellular	76.92	66.43
TraesCS3A01G165600.1	Wheat	extracellular	65.99	63.92
TraesCS1A01G406900.1	Wheat	extracellular	60.32	58.66
TraesCS4A01G345000.1	Wheat	extracellular	60.32	58.66
TraesCS1A01G406800.1	Wheat	extracellular	60.32	58.2
TraesCS4A01G032600.1	Wheat	extracellular	58.3	56.92
TraesCS4A01G034200.1	Wheat	extracellular	57.89	56.3
TraesCS3A01G031700.1	Wheat	extracellular	46.56	55.56
TraesCS4A01G345100.1	Wheat	extracellular	50.2	55.11
TraesCS1A01G199400.1	Wheat	extracellular	49.8	47.49
Solyc07g063210.2.1	Tomato	extracellular	48.99	47.27
VIT_19s0014g02910.t01	Wine grape	extracellular	46.56	44.75
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	49.8	43.77
AT3G15370.2	Thale cress	extracellular	47.77	41.84
TraesCS4A01G470100.1	Wheat	extracellular	42.11	37.55
TraesCS7A01G022400.1	Wheat	extracellular	42.11	37.28
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	48.58	26.97

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF36	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS3A01G165900	EnsemblPlants:TraesCS3A01G165900.1	SEG:seg	:

Description

No Description!

Coordinates

chr3A:+:170811477..170812324

Molecular Weight (calculated)

26228.0 Da

IEP (calculated)

8.940

GRAVY (calculated)

-0.124

Length

247 amino acids

Sequence
(BLAST)

001: MLVLPALCAL LLRAASAAQW TPAHATFYGG GDASGTMGGA CGYGNLYGAG YGTRTTALST ALFNNGASCG ACFTIACDTR KSRMCKPGAS ITVTATNFCP
101: PNYALAGGDN GGWCNPPRQH FDMAQPAWET IAVYKAGIVP VNYRRVRCQR SGGIRFTING HSYFELVLVT NVGGSGGVAQ MWIKGSRTNW MEMSRNWGAN
201: WQSNANLDGQ SLSFRVKSDD GRVVTANDVA PPGWWFGGTY TSGAQLY

Best Arabidopsis Sequence Match ( AT1G69530.1 )
(BLAST)

001: MALVTFLFIA TLGAMTSHVN GYAGGGWVNA HATFYGGGDA SGTMGGACGY GNLYSQGYGT NTAALSTALF NNGLSCGACF EIRCQNDGKW CLPGSIVVTA
101: TNFCPPNNAL PNNAGGWCNP PQQHFDLSQP VFQRIAQYRA GIVPVAYRRV PCVRRGGIRF TINGHSYFNL VLITNVGGAG DVHSAMVKGS RTGWQAMSRN
201: WGQNWQSNSY LNGQSLSFKV TTSDGQTIVS NNVANAGWSF GQTFTGAQLR

Arabidopsis Description

ATEXPA1AT1G69530 protein [Source:UniProtKB/TrEMBL;Acc:C0Z241]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.