Factsheet for TraesCS4A01G470100.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G019600.1	Wheat	plastid	88.45	93.51
TraesCS7A01G022400.1	Wheat	extracellular	83.75	83.15
HORVU7Hr1G002440.2	Barley	extracellular, vacuole	83.03	69.07
Os06t0108600-00	Rice	extracellular	59.21	61.19
Zm00001d045571_P001	Maize	extracellular	59.93	61.03
EER89054	Sorghum	extracellular	60.65	60.87
TraesCS1A01G199400.1	Wheat	extracellular	46.21	49.42
GSMUA_Achr1P15400_001	Banana	extracellular	45.13	47.71
TraesCS1A01G199300.1	Wheat	cytosol, extracellular, peroxisome, plastid	46.57	45.91
TraesCS3A01G165900.1	Wheat	extracellular	37.55	42.11
TraesCS3A01G031700.1	Wheat	extracellular	31.41	42.03
TraesCS3A01G317900.1	Wheat	extracellular	37.55	41.77
TraesCS4A01G034200.1	Wheat	extracellular	38.27	41.73
TraesCS4A01G345000.1	Wheat	extracellular	37.91	41.34
TraesCS1A01G406900.1	Wheat	extracellular	37.91	41.34
TraesCS3A01G318000.1	Wheat	extracellular	36.82	40.96
TraesCS3A01G318100.1	Wheat	extracellular	36.82	40.96
TraesCS4A01G339200.1	Wheat	extracellular	37.55	40.78
TraesCS1A01G406800.1	Wheat	extracellular	37.55	40.62
TraesCS4A01G032600.1	Wheat	extracellular	36.82	40.32
TraesCS4A01G345100.1	Wheat	extracellular	32.49	40.0
TraesCS3A01G165600.1	Wheat	extracellular	35.02	38.04

Protein Annotations

Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	InterPro:Expan_Lol_pI	InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom
InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	GO:GO:0005575	GO:GO:0005576	GO:GO:0008150	GO:GO:0009664
GO:GO:0009987	GO:GO:0016043	InterPro:IPR007112	InterPro:IPR007117	InterPro:IPR036749	InterPro:IPR036908
PFAM:PF01357	PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843
PANTHER:PTHR31867	PANTHER:PTHR31867:SF25	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590
SUPFAM:SSF50685	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4A01G470100	EnsemblPlants:TraesCS4A01G470100.1	SEG:seg

Description

No Description!

Coordinates

chr4A:+:731353311..731354433

Molecular Weight (calculated)

29615.9 Da

IEP (calculated)

7.311

GRAVY (calculated)

-0.051

Length

277 amino acids

Sequence
(BLAST)

001: MARTTPATVA VSVVLFAAAA AQLASAGIPD HYWPAPSAPS TGFPTYGWEN AHATFYGSDS GLGHDFGGAC GYSGSDIASL YSTRTAAMST PLFAKGNGCG
101: RCYEIRCVQS KWCVPGSPSV VITGTNLCPP NWYQASDDGG WCNPPRRHFD MAPPSFYELA GRAAGIVPVQ YRRVPCERKG GVQFCLMGNP YWLLVHINNV
201: GGGGDIGQIA VRETGGVWIQ MTQNWGITFQ AFFELDRSKG LQFIITGGTD GKTIVVGDAV PAWWSTGLCY QGSNNFW

Best Arabidopsis Sequence Match ( AT1G12560.1 )
(BLAST)

001: MGPISSSWSF NKFFSIVFVV FAISGEFVAG YYRPGPWRYA HATFYGDETG GETMGGACGY GNLFNSGYGL STAALSTTLF NDGYGCGQCF QITCSKSPHC
101: YSGKSTVVTA TNLCPPNWYQ DSNAGGWCNP PRTHFDMAKP AFMKLAYWRA GIIPVAYRRV PCQRSGGMRF QFQGNSYWLL IFVMNVGGAG DIKSMAVKGS
201: RTNWISMSHN WGASYQAFSS LYGQSLSFRV TSYTTGETIY AWNVAPANWS GGKTYKSTAN FR

Arabidopsis Description

EXPA7EXPA7 [Source:UniProtKB/TrEMBL;Acc:A0A178W749]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.