CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
BaCelLo:	secretory
EpiLoc:	golgi
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH55327	Soybean	extracellular	96.88	96.5
VIT_19s0014g02910.t01	Wine grape	extracellular	74.61	74.32
Bra027249.1-P	Field mustard	cytosol, extracellular, plastid	64.06	71.3
GSMUA_Achr1P00140_001	Banana	extracellular	66.41	69.96
CDX75827	Canola	extracellular	59.77	68.92
Bra001593.1-P	Field mustard	extracellular	65.62	66.93
CDX97663	Canola	extracellular	65.62	66.93
CDX98555	Canola	extracellular	65.23	66.53
CDX82436	Canola	extracellular	65.23	66.53
Solyc07g063210.2.1	Tomato	extracellular	66.02	66.02
AT3G15370.2	Thale cress	extracellular	65.23	59.22
KRH56899	Soybean	extracellular, mitochondrion, nucleus, plastid	19.92	53.12
KRH51669	Soybean	extracellular	48.44	49.21
KRH67777	Soybean	cytosol	30.08	48.43
KRH77459	Soybean	extracellular	44.14	43.46
KRH44992	Soybean	extracellular	43.75	43.24
KRH01265	Soybean	extracellular	38.28	42.98
KRH27987	Soybean	extracellular	43.36	42.69
KRH04002	Soybean	extracellular	43.36	41.89
PGSC0003DMT400032334	Potato	cytosol, nucleus, vacuole	67.58	38.88
KRH57276	Soybean	extracellular	34.38	38.43

Protein Annotations

EntrezGene:106795376	Gene3D:2.40.40.10	Gene3D:2.60.40.760	MapMan:21.4.2.1	EMBL:ACUP02007456	InterPro:Expan_Lol_pI
InterPro:Expansin	InterPro:Expansin/allergen_DPBB_dom	InterPro:Expansin_CBD	InterPro:Expansin_CBD_sf	EnsemblPlantsGene:GLYMA_12G150900	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0008150	GO:GO:0009664	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0030312	UniProt:I1LT27	InterPro:IPR007112	InterPro:IPR007117
InterPro:IPR036749	InterPro:IPR036908	EnsemblPlants:KRH26080	ProteinID:KRH26080	ProteinID:KRH26080.1	PFAM:PF01357
PFAM:PF03330	PRINTS:PR01225	PRINTS:PR01226	PFscan:PS50842	PFscan:PS50843	PANTHER:PTHR31867
PANTHER:PTHR31867:SF24	InterPro:RlpA-like_DPBB	InterPro:RlpA-like_sf	SMART:SM00837	SUPFAM:SSF49590	SUPFAM:SSF50685
SignalP:SignalP-noTM	UniParc:UPI00023D12C6	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:21702541..21705964

Molecular Weight (calculated)

28582.3 Da

IEP (calculated)

9.878

GRAVY (calculated)

-0.074

Length

256 amino acids

Sequence
(BLAST)

001: MGPLVISSRF LWYFCFVLSA VRVVHVQANN GWLNAHATFY GANQNPTTLG GACGYDDTFH AGFGVNTAAV STMLFRDGEV CGACYQVMCD YRADPKWCLI
101: SRGVTVTATN FCPPNNHGGW CDPPYHHFDM SMPAFFRIAR QGNEGIVPVL YRRVACKRRG GVRFTLKGQS NFNMVMISNV GGSGDVKVVW IRGSRSGAWL
201: PMHRNWGANW QSSADLRNQR LSFKMTLVDG KTLVFLNVVP STWRFGQTFS SKSQFF

Best Arabidopsis Sequence Match ( AT3G15370.1 )
(BLAST)

001: MDMKGTYLVT VILLVSTLSV GMCSNGWIRA HATYYGVNDS PASLGGACGY DNPYHAGFGA HTAALSGELF RSGESCGGCY QVRCDFPADP KWCLRGAAVT
101: VTATNFCPTN NNNGWCNLPR HHFDMSSPAF FRIARRGNEG IVPVFYRRVG CKRRGGVRFT MRGQGNFNMV MISNVGGGGS VRSVAVRGSK GKTWLQMTRN
201: WGANWQSSGD LRGQRLSFKV TLTDSKTQTF LNVVPSSWWF GQTFSSRGRQ FV

Arabidopsis Description

ATEXPA12Expansin 12 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSN2]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.