Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH53242 | Soybean | cytosol | 67.53 | 28.26 |
| KRH16390 | Soybean | nucleus | 72.73 | 27.45 |
| KRH17983 | Soybean | endoplasmic reticulum | 72.73 | 27.45 |
| KRH64671 | Soybean | cytosol | 72.73 | 27.45 |
| KRG99348 | Soybean | nucleus | 11.69 | 4.04 |
| KRH45659 | Soybean | endoplasmic reticulum, nucleus | 11.69 | 4.04 |
| CDX71420 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| MapMan:19.2.6.1.2.3 | Gene3D:3.60.20.10 | UniProt:A0A0R0K0T7 | EMBL:ACUP02003243 | EnsemblPlantsGene:GLYMA_05G116400 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005839 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0051603 | InterPro:IPR029055 | EnsemblPlants:KRH58259 | ProteinID:KRH58259 | ProteinID:KRH58259.1 | InterPro:Ntn_hydrolases_N |
| PFAM:PF00227 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF104 | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | UniParc:UPI0006EDEE79 |
Description
hypothetical protein
Coordinates
chr5:+:30923908..30924846
Molecular Weight (calculated)
8501.1 Da
IEP (calculated)
3.776
GRAVY (calculated)
0.165
Length
77 amino acids
Sequence
(BLAST)
(BLAST)
1: MVPFMQDYSS LIVNNMELAK DFVVSGTASE SLYSASEAMF KPDMVEPEEL FETISQALLS SVDRDCLSGW GGHVYVV
001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDHLF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPFLCQPVIA GLGDDNKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMFKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYVVT PKEVKERILK
201: GRMD
101: GPFLCQPVIA GLGDDNKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMFKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYVVT PKEVKERILK
201: GRMD
Arabidopsis Description
PBC2Proteasome subunit beta type-3-B [Source:UniProtKB/Swiss-Prot;Acc:O81153]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.