Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56729 | Canola | cytosol | 39.84 | 21.97 |
| CDX67842 | Canola | cytosol | 39.84 | 21.97 |
| CDX71775 | Canola | cytosol | 39.02 | 21.52 |
| CDX89080 | Canola | cytosol | 39.02 | 21.52 |
| CDY52345 | Canola | cytosol | 39.02 | 21.52 |
| CDX71344 | Canola | cytosol | 38.21 | 21.08 |
| CDY46344 | Canola | endoplasmic reticulum | 30.89 | 14.39 |
| CDY71260 | Canola | cytosol | 15.45 | 9.95 |
| CDY67773 | Canola | extracellular | 15.45 | 9.95 |
| CDY38347 | Canola | extracellular | 15.45 | 9.95 |
| CDY08181 | Canola | cytosol | 16.26 | 9.8 |
| CDY04667 | Canola | cytosol | 16.26 | 9.8 |
| CDY00398 | Canola | extracellular | 16.26 | 9.8 |
| CDY01316 | Canola | cytosol | 16.26 | 9.71 |
| CDY40889 | Canola | mitochondrion | 4.88 | 7.32 |
| CDY40893 | Canola | mitochondrion | 8.13 | 6.06 |
| CDY07280 | Canola | endoplasmic reticulum, plasma membrane | 8.13 | 4.9 |
| CDY70670 | Canola | cytosol, mitochondrion | 5.69 | 4.38 |
| CDX95297 | Canola | cytosol | 4.07 | 3.65 |
| CDY08180 | Canola | plastid | 4.88 | 2.7 |
| KRH58259 | Soybean | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX71420 | EnsemblPlantsGene:GSBRNA2T00148258001 | Gene3D:3.60.20.10 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PANTHER:PTHR11599 |
| PANTHER:PTHR11599:SF107 | ProteinID:CDX71420 | ProteinID:CDX71420.1 | SEG:seg | SUPFAM:SSF56235 | UniParc:UPI0004EDF1F9 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC04g16550D
Coordinates
chrLK031793:-:748860..750010
Molecular Weight (calculated)
14327.4 Da
IEP (calculated)
11.374
GRAVY (calculated)
-0.441
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MLLKFSSDVL LTASRNEGTK KLLDRFLSKK NLKSFVSSLP FFLSSSTLTR DRLVLARWRN MSGHRWIRLL HYSKIHKIAD KAVLSSSGFQ ADVKALQKVL
101: NSRHLVYQHQ HNKQMSHQDL QEH
101: NSRHLVYQHQ HNKQMSHQDL QEH
001: MTKQHANWSP YDNNGGTCVA IAGSDYCVIA ADTRMSTGYS ILSRDYSKIH KLADRAVLSS SGFQADVKAL QKVLKSRHLI YQHQHNKQMS CPAMAQLLSN
101: TLYFKRFFPY YAFNVLGGLD EEGKGCVFTY DAVGSYERVG YGAQGSGSTL IMPFLDNQLK SPSPLLLPKQ DSNTPLSEAE AVDLVKTVFA SATERDIYTG
201: DKLEIMILKA DGIKTELMDL RKD
101: TLYFKRFFPY YAFNVLGGLD EEGKGCVFTY DAVGSYERVG YGAQGSGSTL IMPFLDNQLK SPSPLLLPKQ DSNTPLSEAE AVDLVKTVFA SATERDIYTG
201: DKLEIMILKA DGIKTELMDL RKD
Arabidopsis Description
PBF1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178V6R9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.