CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
MultiLoc:	golgi
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	extracellular	30.49	45.45
CDY40893	Canola	mitochondrion	78.05	38.79
CDY70670	Canola	cytosol, mitochondrion	74.39	38.12
CDY67773	Canola	extracellular	76.83	32.98
CDY38347	Canola	extracellular	76.83	32.98
CDY71260	Canola	cytosol	75.61	32.46
Zm00001d036756_P001	Maize	cytosol	39.02	32.32
CDY04667	Canola	cytosol	76.83	30.88
CDY08181	Canola	cytosol	76.83	30.88
CDY00398	Canola	extracellular	76.83	30.88
CDY01316	Canola	cytosol	76.83	30.58
VIT_18s0001g02260.t01	Wine grape	cytosol	73.17	29.41
Os06t0643100-01	Rice	plasma membrane	71.95	28.92
KRH16390	Soybean	nucleus	70.73	28.43
EER90101	Sorghum	cytosol	70.73	28.43
Solyc04g009410.2.1	Tomato	extracellular	70.73	28.43
PGSC0003DMT400082475	Potato	cytosol	69.51	27.94
HORVU0Hr1G015750.1	Barley	cytosol	69.51	27.94
KRH17983	Soybean	endoplasmic reticulum	69.51	27.94
TraesCS6B01G174200.1	Wheat	golgi	69.51	27.94
TraesCS6A01G145800.1	Wheat	cytosol	69.51	27.94
EES06388	Sorghum	cytosol	68.29	27.45
TraesCS6D01G135100.1	Wheat	plastid	68.29	27.45
TraesCS7A01G520800.1	Wheat	golgi	68.29	27.45
TraesCS7B01G437600.1	Wheat	cytosol	68.29	27.45
TraesCS7D01G510600.1	Wheat	cytosol	68.29	27.45
Os02t0182500-01	Rice	cytosol	68.29	27.45
Zm00001d015526_P002	Maize	cytosol	68.29	26.42
Zm00001d046600_P001	Maize	cytosol	68.29	24.35
HORVU7Hr1G115980.1	Barley	plastid	68.29	21.13
Zm00001d036758_P002	Maize	extracellular	29.27	20.87
CDY56729	Canola	cytosol	29.27	10.76
CDY52345	Canola	cytosol	29.27	10.76
CDX89080	Canola	cytosol	29.27	10.76
CDX71775	Canola	cytosol	29.27	10.76
CDX71344	Canola	cytosol	29.27	10.76
CDX67842	Canola	cytosol	29.27	10.76
CDY07280	Canola	endoplasmic reticulum, plasma membrane	20.73	8.33
CDY46344	Canola	endoplasmic reticulum	21.95	6.82
CDX95297	Canola	cytosol	9.76	5.84
CDX71420	Canola	plastid	7.32	4.88
CDY08180	Canola	plastid	10.98	4.05
HORVU6Hr1G065260.1	Barley	cytosol	1.22	2.0

Protein Annotations

Gene3D:3.60.20.10	MapMan:35.1	GO:A0A078HU51	UniProt:A0A078HU51	EnsemblPlants:CDY40889	ProteinID:CDY40889
ProteinID:CDY40889.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0051603	EnsemblPlantsGene:GSBRNA2T00071922001	InterPro:IPR029055	InterPro:Ntn_hydrolases_N
PFAM:PF00227	PANTHER:PTHR11599	PANTHER:PTHR11599:SF104	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI0004EE9536

Description

BnaCnng09800DBnaCnng09800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HU51]

Coordinates

chrLK032483:+:245754..248855

Molecular Weight (calculated)

9510.7 Da

IEP (calculated)

8.471

GRAVY (calculated)

0.093

Length

82 amino acids

Sequence
(BLAST)

1: MVWRILLYQR LVFRHKLYQL REERGMKPET FASLVSAILS ENRFGPYLCQ PVIAGLGEDD KPFICTMDSI GAKYYALTSF LC

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.