Factsheet for Zm00001d036756_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G065260.1	Barley	cytosol	41.41	82.0
KRH16390	Soybean	nucleus	94.95	46.08
KRH17983	Soybean	endoplasmic reticulum	94.95	46.08
AT1G77440.1	Thale cress	cytosol	93.94	45.59
GSMUA_Achr4P01890_001	Banana	cytosol	93.94	45.59
Zm00001d015526_P002	Maize	cytosol	96.97	45.28
Bra038565.1-P	Field mustard	cytosol	92.93	45.1
CDY00398	Canola	extracellular	92.93	45.1
CDY04667	Canola	cytosol	92.93	45.1
CDY08181	Canola	cytosol	92.93	45.1
KRH64671	Soybean	cytosol	92.93	45.1
AT1G21720.1	Thale cress	cytosol	92.93	45.1
Bra016408.1-P	Field mustard	cytosol	91.92	44.61
Bra012292.1-P	Field mustard	cytosol	91.92	44.61
CDY01316	Canola	cytosol	91.92	44.17
Solyc04g009410.2.1	Tomato	extracellular	88.89	43.14
VIT_18s0001g02260.t01	Wine grape	cytosol	87.88	42.65
PGSC0003DMT400082475	Potato	cytosol	87.88	42.65
Zm00001d046600_P001	Maize	cytosol	98.99	42.61
GSMUA_Achr9P13190_001	Banana	cytosol	81.82	42.41
Bra008308.1-P	Field mustard	cytosol	79.8	41.36
CDY38347	Canola	extracellular	79.8	41.36
CDY71260	Canola	cytosol	78.79	40.84
CDY67773	Canola	extracellular	78.79	40.84
CDY40889	Canola	mitochondrion	32.32	39.02
KRH53242	Soybean	cytosol	70.71	38.04
CDY40893	Canola	mitochondrion	47.47	28.48
CDY70670	Canola	cytosol, mitochondrion	39.39	24.38
Bra017945.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	92.93	21.9
Zm00001d006085_P002	Maize	extracellular	31.31	14.03
Zm00001d021051_P002	Maize	mitochondrion	31.31	14.03
Zm00001d018456_P001	Maize	cytosol	15.15	13.89
Zm00001d043281_P001	Maize	cytosol	15.15	13.89
Zm00001d031599_P001	Maize	cytosol, extracellular	26.26	11.87
Zm00001d011021_P001	Maize	cytosol, extracellular, mitochondrion, plastid	9.09	10.98
Zm00001d036758_P002	Maize	extracellular	1.01	0.87

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	UniProt:A0A1D6LQX4	ProteinID:AQK81864.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227
ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF104	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type
InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI000182FEC2	EnsemblPlantsGene:Zm00001d036756	EnsemblPlants:Zm00001d036756_P001	EnsemblPlants:Zm00001d036756_T001

Description

No Description!

Coordinates

chr6:+:99934740..99940962

Molecular Weight (calculated)

11392.9 Da

IEP (calculated)

9.769

GRAVY (calculated)

-0.086

Length

99 amino acids

Sequence
(BLAST)

1: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RVFKIHDKLY IGLSGLATDA QTLYQRLVFR HKLYQLREER DMKPETFASL VSALLYEKR

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.