Factsheet for HORVU6Hr1G065260.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036756_P001	Maize	cytosol	82.0	41.41
HORVU0Hr1G015750.1	Barley	cytosol	88.0	21.57
GSMUA_Achr9P13190_001	Banana	cytosol	78.0	20.42
KRH64671	Soybean	cytosol	78.0	19.12
KRH17983	Soybean	endoplasmic reticulum	78.0	19.12
KRH16390	Soybean	nucleus	78.0	19.12
GSMUA_Achr4P01890_001	Banana	cytosol	78.0	19.12
Bra008308.1-P	Field mustard	cytosol	70.0	18.32
CDY38347	Canola	extracellular	70.0	18.32
AT1G77440.1	Thale cress	cytosol	74.0	18.14
Solyc04g009410.2.1	Tomato	extracellular	74.0	18.14
PGSC0003DMT400082475	Potato	cytosol	74.0	18.14
CDY67773	Canola	extracellular	68.0	17.8
CDY71260	Canola	cytosol	68.0	17.8
AT1G21720.1	Thale cress	cytosol	72.0	17.65
CDY08181	Canola	cytosol	72.0	17.65
CDY04667	Canola	cytosol	72.0	17.65
Bra016408.1-P	Field mustard	cytosol	72.0	17.65
Bra038565.1-P	Field mustard	cytosol	72.0	17.65
CDY00398	Canola	extracellular	72.0	17.65
CDY01316	Canola	cytosol	72.0	17.48
Bra012292.1-P	Field mustard	cytosol	70.0	17.16
HORVU7Hr1G115980.1	Barley	plastid	88.0	16.6
VIT_18s0001g02260.t01	Wine grape	cytosol	66.0	16.18
KRH53242	Soybean	cytosol	50.0	13.59
Bra017945.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	72.0	8.57
CDY40893	Canola	mitochondrion	24.0	7.27
HORVU5Hr1G076130.2	Barley	plastid	28.0	5.43
CDY70670	Canola	cytosol, mitochondrion	10.0	3.12
CDY40889	Canola	mitochondrion	2.0	1.22

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	UniProt:A0A287UGD3	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175
GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005839
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0051603	EnsemblPlantsGene:HORVU6Hr1G065260	EnsemblPlants:HORVU6Hr1G065260.1	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227
ScanProsite:PS00854	PANTHER:PTHR11599	PANTHER:PTHR11599:SF104	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_sua/b	SUPFAM:SSF56235
UniParc:UPI000B479D68	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:447169663..447170157

Molecular Weight (calculated)

5408.7 Da

IEP (calculated)

8.821

GRAVY (calculated)

0.446

Length

50 amino acids

Sequence
(BLAST)

1: MVAMVGKNCF AIASDRRLSV HLQTVATDFE RVFKIHGKLC ISLSGLASDA

Best Arabidopsis Sequence Match ( AT1G77440.2 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDHLF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPFLCQPVIA GLGDDNKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMFKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYVVT PKEVKERILK
201: GRMD

Arabidopsis Description

PBC2Proteasome subunit beta type-3-B [Source:UniProtKB/Swiss-Prot;Acc:O81153]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.