Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008308.1-P | Field mustard | cytosol | 90.2 | 96.34 |
| AT1G21720.1 | Thale cress | cytosol | 96.08 | 96.08 |
| CDY38347 | Canola | extracellular | 89.71 | 95.81 |
| Zm00001d036756_P001 | Maize | cytosol | 45.59 | 93.94 |
| KRH16390 | Soybean | nucleus | 93.14 | 93.14 |
| KRH17983 | Soybean | endoplasmic reticulum | 92.65 | 92.65 |
| Solyc04g009410.2.1 | Tomato | extracellular | 91.18 | 91.18 |
| PGSC0003DMT400082475 | Potato | cytosol | 91.18 | 91.18 |
| VIT_18s0001g02260.t01 | Wine grape | cytosol | 89.71 | 89.71 |
| EES06388 | Sorghum | cytosol | 88.73 | 88.73 |
| Os06t0643100-01 | Rice | plasma membrane | 87.75 | 87.75 |
| EER90101 | Sorghum | cytosol | 87.25 | 87.25 |
| Os02t0182500-01 | Rice | cytosol | 86.27 | 86.27 |
| TraesCS6A01G145800.1 | Wheat | cytosol | 86.27 | 86.27 |
| TraesCS6B01G174200.1 | Wheat | golgi | 86.27 | 86.27 |
| TraesCS6D01G135100.1 | Wheat | plastid | 86.27 | 86.27 |
| HORVU0Hr1G015750.1 | Barley | cytosol | 85.78 | 85.78 |
| TraesCS7D01G510600.1 | Wheat | cytosol | 85.78 | 85.78 |
| TraesCS7A01G520800.1 | Wheat | golgi | 85.29 | 85.29 |
| TraesCS7B01G437600.1 | Wheat | cytosol | 85.29 | 85.29 |
| Zm00001d015526_P002 | Maize | cytosol | 86.27 | 83.02 |
| CDY40893 | Canola | mitochondrion | 66.18 | 81.82 |
| Zm00001d046600_P001 | Maize | cytosol | 85.78 | 76.09 |
| Zm00001d036758_P002 | Maize | extracellular | 42.16 | 74.78 |
| HORVU6Hr1G065260.1 | Barley | cytosol | 18.14 | 74.0 |
| HORVU7Hr1G115980.1 | Barley | plastid | 83.82 | 64.53 |
| GSMUA_Achr10P... | Banana | extracellular | 12.25 | 45.45 |
| AT3G60820.1 | Thale cress | cytosol | 25.49 | 23.32 |
Protein Annotations
| MapMan:19.2.6.1.2.3 | Gene3D:3.60.20.10 | EntrezGene:844080 | ProteinID:AAG51672.1 | ProteinID:AEE35977.1 | ProteinID:AEE35978.1 |
| EMBL:AF043533 | EMBL:AF385730 | ArrayExpress:AT1G77440 | EnsemblPlantsGene:AT1G77440 | RefSeq:AT1G77440 | TAIR:AT1G77440 |
| RefSeq:AT1G77440-TAIR-G | EnsemblPlants:AT1G77440.1 | TAIR:AT1G77440.1 | EMBL:AY081735 | GO:GO:0000502 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019774 |
| GO:GO:0043161 | GO:GO:0051603 | InterPro:IPR023333 | InterPro:IPR029055 | RefSeq:NP_001031294.1 | RefSeq:NP_565156.1 |
| InterPro:Ntn_hydrolases_N | UniProt:O81153 | Symbol:PBC2 | PFAM:PF00227 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| ScanProsite:PS00854 | PFscan:PS51476 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF104 | InterPro:Proteasome_beta_3 | InterPro:Proteasome_bsu_CS |
| InterPro:Proteasome_suB-type | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | UniParc:UPI0000000B64 | : | : |
Description
PBC2Proteasome subunit beta type-3-B [Source:UniProtKB/Swiss-Prot;Acc:O81153]
Coordinates
chr1:+:29096201..29098494
Molecular Weight (calculated)
22760.5 Da
IEP (calculated)
5.699
GRAVY (calculated)
-0.017
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDHLF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPFLCQPVIA GLGDDNKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMFKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYVVT PKEVKERILK
201: GRMD
101: GPFLCQPVIA GLGDDNKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMFKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYVVT PKEVKERILK
201: GRMD
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.