Factsheet for TraesCS7A01G520800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G437600.1	Wheat	cytosol	100.0	100.0
TraesCS7D01G510600.1	Wheat	cytosol	99.51	99.51
TraesCS6A01G145800.1	Wheat	cytosol	96.57	96.57
EER90101	Sorghum	cytosol	91.67	91.67
Os06t0643100-01	Rice	plasma membrane	91.67	91.67
GSMUA_Achr9P13190_001	Banana	cytosol	85.78	91.62
GSMUA_Achr4P01890_001	Banana	cytosol	91.18	91.18
KRH17983	Soybean	endoplasmic reticulum	88.73	88.73
KRH16390	Soybean	nucleus	88.73	88.73
KRH64671	Soybean	cytosol	87.25	87.25
AT1G21720.1	Thale cress	cytosol	86.27	86.27
CDY08181	Canola	cytosol	86.27	86.27
CDY04667	Canola	cytosol	86.27	86.27
Bra038565.1-P	Field mustard	cytosol	86.27	86.27
CDY00398	Canola	extracellular	85.78	85.78
Bra016408.1-P	Field mustard	cytosol	85.78	85.78
Bra012292.1-P	Field mustard	cytosol	85.78	85.78
CDY38347	Canola	extracellular	79.9	85.34
CDY67773	Canola	extracellular	79.9	85.34
Bra008308.1-P	Field mustard	cytosol	79.9	85.34
Solyc04g009410.2.1	Tomato	extracellular	85.29	85.29
PGSC0003DMT400082475	Potato	cytosol	85.29	85.29
AT1G77440.1	Thale cress	cytosol	85.29	85.29
CDY01316	Canola	cytosol	85.78	84.95
CDY71260	Canola	cytosol	79.41	84.82
KRH53242	Soybean	cytosol	76.47	84.78
VIT_18s0001g02260.t01	Wine grape	cytosol	83.82	83.82
Zm00001d036758_P002	Maize	extracellular	45.1	80.0
Zm00001d046600_P001	Maize	cytosol	89.22	79.13
CDY70670	Canola	cytosol, mitochondrion	60.29	76.88
HORVU7Hr1G115980.1	Barley	plastid	98.53	75.85
CDY40893	Canola	mitochondrion	61.27	75.76
CDY40889	Canola	mitochondrion	27.45	68.29
Bra017945.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	81.37	39.52
TraesCS5A01G285600.1	Wheat	plastid	22.55	20.81

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005839	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019774	GO:GO:0043161
GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	ScanProsite:PS00854
PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF104	InterPro:Proteasome_beta_3	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type
InterPro:Proteasome_sua/b	SUPFAM:SSF56235	EnsemblPlantsGene:TraesCS7A01G520800	EnsemblPlants:TraesCS7A01G520800.1	TIGR:cd03759	:

Description

No Description!

Coordinates

chr7A:+:705123692..705126892

Molecular Weight (calculated)

22806.5 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.049

Length

204 amino acids

Sequence
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTVATDFQ RVFKIHGKLY IGLSGLASDA QTLYQRLVFK HKLYQLREER DMKPETFASL VSSMLYEKRF
101: GPYFCQPIIA GLGQDDEPFI CTMDCIGAKE LAKDFVVSGT ASESLYGACE SMYKPNMEPE ELFETISQAL LSSVDRDCLS GWGGYVLIVT PTEVQERVLK
201: GRMD

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.