Factsheet for Zm00001d046600_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d036756_P001	Maize	cytosol	42.61	98.99
EER90101	Sorghum	cytosol	86.52	97.55
Os06t0643100-01	Rice	plasma membrane	82.17	92.65
GSMUA_Achr9P13190_001	Banana	cytosol	74.78	90.05
TraesCS7B01G437600.1	Wheat	cytosol	79.13	89.22
TraesCS7A01G520800.1	Wheat	golgi	79.13	89.22
TraesCS7D01G510600.1	Wheat	cytosol	78.7	88.73
GSMUA_Achr4P01890_001	Banana	cytosol	78.7	88.73
Zm00001d036758_P002	Maize	extracellular	44.35	88.7
Zm00001d015526_P002	Maize	cytosol	81.3	88.21
KRH17983	Soybean	endoplasmic reticulum	77.83	87.75
KRH16390	Soybean	nucleus	76.96	86.76
KRH64671	Soybean	cytosol	76.96	86.76
AT1G77440.1	Thale cress	cytosol	76.09	85.78
AT1G21720.1	Thale cress	cytosol	76.09	85.78
CDY08181	Canola	cytosol	75.65	85.29
CDY04667	Canola	cytosol	75.65	85.29
Bra038565.1-P	Field mustard	cytosol	75.65	85.29
Bra012292.1-P	Field mustard	cytosol	75.22	84.8
Bra016408.1-P	Field mustard	cytosol	75.22	84.8
CDY00398	Canola	extracellular	75.22	84.8
CDY01316	Canola	cytosol	75.22	83.98
Solyc04g009410.2.1	Tomato	extracellular	74.35	83.82
PGSC0003DMT400082475	Potato	cytosol	74.35	83.82
CDY38347	Canola	extracellular	69.57	83.77
Bra008308.1-P	Field mustard	cytosol	69.57	83.77
CDY71260	Canola	cytosol	69.57	83.77
CDY67773	Canola	extracellular	69.57	83.77
KRH53242	Soybean	cytosol	66.52	83.15
VIT_18s0001g02260.t01	Wine grape	cytosol	73.48	82.84
CDY70670	Canola	cytosol, mitochondrion	51.3	73.75
CDY40893	Canola	mitochondrion	52.17	72.73
CDY40889	Canola	mitochondrion	24.35	68.29
HORVU7Hr1G115980.1	Barley	plastid	77.83	67.55
Bra017945.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	72.17	39.52
Zm00001d018456_P001	Maize	cytosol	13.91	29.63
Zm00001d043281_P001	Maize	cytosol	13.91	29.63
Zm00001d011021_P001	Maize	cytosol, extracellular, mitochondrion, plastid	9.57	26.83
Zm00001d021051_P002	Maize	mitochondrion	23.04	23.98
Zm00001d006085_P002	Maize	extracellular	23.04	23.98
Zm00001d031599_P001	Maize	cytosol, extracellular	20.87	21.92

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	UniProt:A0A1D6P3Y5	ProteinID:AQL04684.1	GO:GO:0000502	GO:GO:0003674
GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508	GO:GO:0008150	GO:GO:0008152
GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019774
GO:GO:0043161	GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227
ScanProsite:PS00854	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF104	InterPro:Proteasome_beta_3	InterPro:Proteasome_bsu_CS
InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI0008436565	EnsemblPlantsGene:Zm00001d046600	EnsemblPlants:Zm00001d046600_P001
EnsemblPlants:Zm00001d046600_T001	:	:	:	:	:

Description

Proteasome subunit beta type

Coordinates

chr9:+:98187943..98192600

Molecular Weight (calculated)

25715.9 Da

IEP (calculated)

6.119

GRAVY (calculated)

-0.023

Length

230 amino acids

Sequence
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RVFKVHDKLY IGLSGLATDA QTLYQRLVFR HKLYQLREER DMKPETFASL VSALLYEKRF
101: GPYFCQPVIA GLGDDNVPFI CTMDCLGAKV LVKAIFSANE SCATSSSKLP WKCHWELAKD FVVSGTASES LYGACESMYK PNMEPDELFE TVSQALNSSI
201: DRDCLSGWGG YVLIVTPTEV REHVIKSRMD

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.