Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES06388 | Sorghum | cytosol | 93.4 | 97.06 |
| Zm00001d036756_P001 | Maize | cytosol | 45.28 | 96.97 |
| Os02t0182500-01 | Rice | cytosol | 91.51 | 95.1 |
| TraesCS6B01G174200.1 | Wheat | golgi | 88.21 | 91.67 |
| TraesCS6A01G145800.1 | Wheat | cytosol | 88.21 | 91.67 |
| HORVU0Hr1G015750.1 | Barley | cytosol | 88.21 | 91.67 |
| TraesCS6D01G135100.1 | Wheat | plastid | 87.26 | 90.69 |
| GSMUA_Achr4P01890_001 | Banana | cytosol | 87.26 | 90.69 |
| GSMUA_Achr9P13190_001 | Banana | cytosol | 81.6 | 90.58 |
| KRH16390 | Soybean | nucleus | 85.85 | 89.22 |
| KRH17983 | Soybean | endoplasmic reticulum | 85.85 | 89.22 |
| KRH64671 | Soybean | cytosol | 84.91 | 88.24 |
| AT1G21720.1 | Thale cress | cytosol | 83.96 | 87.25 |
| CDY08181 | Canola | cytosol | 83.49 | 86.76 |
| CDY04667 | Canola | cytosol | 83.49 | 86.76 |
| Bra038565.1-P | Field mustard | cytosol | 83.49 | 86.76 |
| AT1G77440.1 | Thale cress | cytosol | 83.02 | 86.27 |
| CDY00398 | Canola | extracellular | 83.02 | 86.27 |
| Bra012292.1-P | Field mustard | cytosol | 83.02 | 86.27 |
| Bra016408.1-P | Field mustard | cytosol | 83.02 | 86.27 |
| KRH53242 | Soybean | cytosol | 74.53 | 85.87 |
| Bra008308.1-P | Field mustard | cytosol | 77.36 | 85.86 |
| CDY38347 | Canola | extracellular | 77.36 | 85.86 |
| CDY01316 | Canola | cytosol | 83.02 | 85.44 |
| CDY67773 | Canola | extracellular | 76.89 | 85.34 |
| VIT_18s0001g02260.t01 | Wine grape | cytosol | 82.08 | 85.29 |
| PGSC0003DMT400082475 | Potato | cytosol | 82.08 | 85.29 |
| Solyc04g009410.2.1 | Tomato | extracellular | 82.08 | 85.29 |
| CDY71260 | Canola | cytosol | 76.42 | 84.82 |
| Zm00001d046600_P001 | Maize | cytosol | 88.21 | 81.3 |
| Zm00001d036758_P002 | Maize | extracellular | 42.92 | 79.13 |
| CDY70670 | Canola | cytosol, mitochondrion | 58.02 | 76.88 |
| CDY40893 | Canola | mitochondrion | 58.96 | 75.76 |
| CDY40889 | Canola | mitochondrion | 26.42 | 68.29 |
| Bra017945.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole | 78.77 | 39.76 |
| Zm00001d018456_P001 | Maize | cytosol | 13.68 | 26.85 |
| Zm00001d043281_P001 | Maize | cytosol | 13.68 | 26.85 |
| Zm00001d011021_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 10.38 | 26.83 |
| Zm00001d006085_P002 | Maize | extracellular | 24.06 | 23.08 |
| Zm00001d021051_P002 | Maize | mitochondrion | 24.06 | 23.08 |
| Zm00001d031599_P001 | Maize | cytosol, extracellular | 21.7 | 21.0 |
Protein Annotations
| EntrezGene:100272320 | MapMan:19.2.6.1.2.3 | Gene3D:3.60.20.10 | UniProt:A0A1D6H2M0 | ProteinID:AQK69084.1 | GO:GO:0000502 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005839 | GO:GO:0006508 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0019774 | GO:GO:0043161 | GO:GO:0051603 | InterPro:IPR023333 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N |
| PFAM:PF00227 | ScanProsite:PS00854 | PFscan:PS51476 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF104 | InterPro:Proteasome_beta_3 |
| InterPro:Proteasome_bsu_CS | InterPro:Proteasome_suB-type | InterPro:Proteasome_sua/b | SUPFAM:SSF56235 | UniParc:UPI000843C477 | EnsemblPlantsGene:Zm00001d015526 |
| EnsemblPlants:Zm00001d015526_P002 | EnsemblPlants:Zm00001d015526_T002 | : | : | : | : |
Description
Proteasome subunit beta type
Coordinates
chr5:-:95945281..95948517
Molecular Weight (calculated)
23829.7 Da
IEP (calculated)
4.931
GRAVY (calculated)
-0.040
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFR RVFKVHDKLY IGLSGLATDA QTLWVSRILD SYQRLVFRHK LYQLMEERDM KPETFASLVS
101: ALLYEKRFGP YFCQPVIAGL GDNDEPFICT MDCIGAKELA KDFVVSGTAS ESLYGACESM YKPNMEPEEL FETISQALQA SVDRDCLSGW GGYVLVVTHT
201: EVQERVLKGR MD
101: ALLYEKRFGP YFCQPVIAGL GDNDEPFICT MDCIGAKELA KDFVVSGTAS ESLYGACESM YKPNMEPEEL FETISQALQA SVDRDCLSGW GGYVLVVTHT
201: EVQERVLKGR MD
001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD
Arabidopsis Description
PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.