Factsheet for Os02t0182500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
plastid 1
cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	mitochondrion
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06388	Sorghum	cytosol	96.57	96.57
Os06t0643100-01	Rice	plasma membrane	95.59	95.59
GSMUA_Achr9P13190_001	Banana	cytosol	86.76	92.67
TraesCS6B01G174200.1	Wheat	golgi	92.65	92.65
TraesCS6A01G145800.1	Wheat	cytosol	92.65	92.65
HORVU0Hr1G015750.1	Barley	cytosol	92.65	92.65
TraesCS6D01G135100.1	Wheat	plastid	91.67	91.67
GSMUA_Achr4P01890_001	Banana	cytosol	91.67	91.67
Zm00001d015526_P002	Maize	cytosol	95.1	91.51
KRH64671	Soybean	cytosol	89.22	89.22
KRH17983	Soybean	endoplasmic reticulum	88.73	88.73
KRH16390	Soybean	nucleus	88.73	88.73
AT1G21720.1	Thale cress	cytosol	87.25	87.25
CDY08181	Canola	cytosol	86.76	86.76
CDY04667	Canola	cytosol	86.76	86.76
Bra038565.1-P	Field mustard	cytosol	86.76	86.76
CDY00398	Canola	extracellular	86.27	86.27
AT1G77440.1	Thale cress	cytosol	86.27	86.27
Bra012292.1-P	Field mustard	cytosol	86.27	86.27
Bra016408.1-P	Field mustard	cytosol	86.27	86.27
KRH53242	Soybean	cytosol	77.45	85.87
VIT_18s0001g02260.t01	Wine grape	cytosol	85.78	85.78
CDY01316	Canola	cytosol	86.27	85.44
CDY38347	Canola	extracellular	79.9	85.34
Bra008308.1-P	Field mustard	cytosol	79.9	85.34
CDY67773	Canola	extracellular	79.9	85.34
PGSC0003DMT400082475	Potato	cytosol	85.29	85.29
Solyc04g009410.2.1	Tomato	extracellular	85.29	85.29
CDY71260	Canola	cytosol	79.41	84.82
CDY70670	Canola	cytosol, mitochondrion	59.31	75.62
CDY40893	Canola	mitochondrion	60.29	74.55
CDY40889	Canola	mitochondrion	27.45	68.29
Bra017945.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	81.86	39.76
Os09t0505600-01	Rice	plastid	25.49	23.53
Os08t0529100-01	Rice	cytosol	23.53	21.92

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	EntrezGene:4328517	EMBL:AK242205	ProteinID:BAD25149.1	ProteinID:BAS77317.1
GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0004175	GO:GO:0004298	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005839	GO:GO:0006508
GO:GO:0008150	GO:GO:0008152	GO:GO:0008233	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0019774	GO:GO:0043161	GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055
InterPro:Ntn_hydrolases_N	EnsemblPlantsGene:Os02g0182500	EnsemblPlants:Os02t0182500-01	PFAM:PF00227	ScanProsite:PS00854	PFscan:PS51476
PANTHER:PTHR11599	PANTHER:PTHR11599:SF104	InterPro:Proteasome_beta_3	InterPro:Proteasome_bsu_CS	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b
UniProt:Q6H800	SUPFAM:SSF56235	UniParc:UPI00003B437E	RefSeq:XP_015627704.1	:	:

Description

Similar to Proteasome subunit beta type 3 (EC 3.4.25.1) (20S proteasome alpha subunit C) (20S proteasome subunit beta-3). (Os02t0182500-01)

Coordinates

chr2:-:4598883..4601382

Molecular Weight (calculated)

22785.4 Da

IEP (calculated)

4.901

GRAVY (calculated)

-0.043

Length

204 amino acids

Sequence
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTVATDFQ RVFKIHDKLY IGLSGLATDA QTLYQRLVFR HKLYQLREER DMKPQAFASL VSALLYEKRF
101: GPYFCQPVIA GLGDNDEPFI CTMDCIGAKE LAKDFVVSGT ASESLYGACE SMYKPSMEPE ELFETISQAL QASVDRDCLS GWGGYVLLVT PTEVQERVIK
201: GRMD

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.