CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH64671	Soybean	cytosol	95.11	85.78
VIT_18s0001g02260.t01	Wine grape	cytosol	90.76	81.86
KRH16390	Soybean	nucleus	89.67	80.88
KRH17983	Soybean	endoplasmic reticulum	89.67	80.88
PGSC0003DMT400082475	Potato	cytosol	86.96	78.43
Solyc04g009410.2.1	Tomato	extracellular	86.41	77.94
Os06t0643100-01	Rice	plasma membrane	86.41	77.94
EES06388	Sorghum	cytosol	85.87	77.45
TraesCS6B01G174200.1	Wheat	golgi	85.87	77.45
TraesCS6A01G145800.1	Wheat	cytosol	85.87	77.45
Os02t0182500-01	Rice	cytosol	85.87	77.45
HORVU0Hr1G015750.1	Barley	cytosol	85.33	76.96
TraesCS6D01G135100.1	Wheat	plastid	85.33	76.96
TraesCS7D01G510600.1	Wheat	cytosol	85.33	76.96
EER90101	Sorghum	cytosol	85.33	76.96
TraesCS7A01G520800.1	Wheat	golgi	84.78	76.47
TraesCS7B01G437600.1	Wheat	cytosol	84.78	76.47
Zm00001d015526_P002	Maize	cytosol	85.87	74.53
Zm00001d036758_P002	Maize	extracellular	46.2	73.91
Zm00001d036756_P001	Maize	cytosol	38.04	70.71
KRH58259	Soybean	cytosol	28.26	67.53
Zm00001d046600_P001	Maize	cytosol	83.15	66.52
HORVU7Hr1G115980.1	Barley	plastid	83.15	57.74
HORVU6Hr1G065260.1	Barley	cytosol	13.59	50.0
KRG99348	Soybean	nucleus	25.54	21.08
KRH45659	Soybean	endoplasmic reticulum, nucleus	25.0	20.63

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	UniProt:A0A0R0JFH3	EMBL:ACUP02003455	EnsemblPlantsGene:GLYMA_06G113600	GO:GO:0003674
GO:GO:0003824	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005839
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0019774	GO:GO:0043161	GO:GO:0051603	InterPro:IPR023333	InterPro:IPR029055	EnsemblPlants:KRH53242
ProteinID:KRH53242	ProteinID:KRH53242.1	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFscan:PS51476	PANTHER:PTHR11599
PANTHER:PTHR11599:SF104	InterPro:Proteasome_beta_3	InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI0006ED64B5

Description

hypothetical protein

Coordinates

chr6:+:9220752..9223282

Molecular Weight (calculated)

20449.7 Da

IEP (calculated)

4.875

GRAVY (calculated)

-0.048

Length

184 amino acids

Sequence
(BLAST)

001: MSIFEYNGSA LVAMVGKNCF AIASDRRLAV HRPLGLATDA QTLYQRLLFG HKLYQLREER DMKPQTFASL VSAILYENRF GPYFCQPVIA GLGDDDKPFI
101: CTMDAIGAKE LAKDFAVAGT ASESLYGACE SMFKPDMEPE ELFEMISQAL LSSVDRDCLS GWGGHIYVVT PTEVKERILK GRMD

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.