Factsheet for Zm00001d036758_P002

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

cytosol 1
extracellular 5
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY70670	Canola	cytosol, mitochondrion	72.17	51.88
EER90101	Sorghum	cytosol	88.7	50.0
GSMUA_Achr9P13190_001	Banana	cytosol	80.87	48.69
KRH53242	Soybean	cytosol	73.91	46.2
Os06t0643100-01	Rice	plasma membrane	81.74	46.08
CDY40893	Canola	mitochondrion	65.22	45.45
TraesCS7B01G437600.1	Wheat	cytosol	80.0	45.1
TraesCS7A01G520800.1	Wheat	golgi	80.0	45.1
CDY71260	Canola	cytosol	74.78	45.03
CDY67773	Canola	extracellular	74.78	45.03
TraesCS7D01G510600.1	Wheat	cytosol	79.13	44.61
CDY38347	Canola	extracellular	73.91	44.5
Bra008308.1-P	Field mustard	cytosol	73.91	44.5
Zm00001d046600_P001	Maize	cytosol	88.7	44.35
GSMUA_Achr4P01890_001	Banana	cytosol	78.26	44.12
PGSC0003DMT400082475	Potato	cytosol	77.39	43.63
KRH64671	Soybean	cytosol	77.39	43.63
KRH17983	Soybean	endoplasmic reticulum	77.39	43.63
Solyc04g009410.2.1	Tomato	extracellular	76.52	43.14
Zm00001d015526_P002	Maize	cytosol	79.13	42.92
KRH16390	Soybean	nucleus	75.65	42.65
AT1G21720.1	Thale cress	cytosol	75.65	42.65
AT1G77440.1	Thale cress	cytosol	74.78	42.16
VIT_18s0001g02260.t01	Wine grape	cytosol	74.78	42.16
CDY08181	Canola	cytosol	74.78	42.16
CDY04667	Canola	cytosol	74.78	42.16
Bra038565.1-P	Field mustard	cytosol	74.78	42.16
Bra012292.1-P	Field mustard	cytosol	74.78	42.16
Bra016408.1-P	Field mustard	cytosol	74.78	42.16
CDY01316	Canola	cytosol	74.78	41.75
CDY00398	Canola	extracellular	73.91	41.67
HORVU7Hr1G115980.1	Barley	plastid	79.13	34.34
CDY40889	Canola	mitochondrion	20.87	29.27
Zm00001d011021_P001	Maize	cytosol, extracellular, mitochondrion, plastid	13.91	19.51
Bra017945.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, plastid, vacuole	67.83	18.57
Zm00001d018456_P001	Maize	cytosol	16.52	17.59
Zm00001d043281_P001	Maize	cytosol	16.52	17.59
Zm00001d031599_P001	Maize	cytosol, extracellular	20.87	10.96
Zm00001d006085_P002	Maize	extracellular	20.87	10.86
Zm00001d021051_P002	Maize	mitochondrion	20.87	10.86
Zm00001d036756_P001	Maize	cytosol	0.87	1.01

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	UniProt:A0A1D6LQX7	ProteinID:AQK81865.1	ProteinID:AQK81866.1	GO:GO:0000502
GO:GO:0003674	GO:GO:0003824	GO:GO:0004298	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0051603	InterPro:IPR029055	InterPro:Ntn_hydrolases_N	PFAM:PF00227	PANTHER:PTHR11599
PANTHER:PTHR11599:SF104	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI000842FC8E	EnsemblPlantsGene:Zm00001d036758	EnsemblPlants:Zm00001d036758_P002
EnsemblPlants:Zm00001d036758_T002	:	:	:	:	:

Description

Proteasome subunit beta type-3-A

Coordinates

chr6:+:99942701..99945111

Molecular Weight (calculated)

12811.3 Da

IEP (calculated)

4.072

GRAVY (calculated)

0.090

Length

115 amino acids

Sequence
(BLAST)

001: MLQFFIFFKE FGPYFCQPVI AGLGDDNVPF ICTMDCLGAK ELAKDFVVSG TASESLYGAC ESMYKPDMQP DELFETISQA LNSSVDRDCL SGWGGYVLIV
101: TPTEVREHVI KSRMD

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.