Factsheet for GSMUA_Achr9P13190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P01890_001	Banana	cytosol	96.34	90.2
Os06t0643100-01	Rice	plasma membrane	92.67	86.76
Os02t0182500-01	Rice	cytosol	92.67	86.76
EES06388	Sorghum	cytosol	92.15	86.27
TraesCS6B01G174200.1	Wheat	golgi	92.15	86.27
TraesCS6A01G145800.1	Wheat	cytosol	92.15	86.27
HORVU0Hr1G015750.1	Barley	cytosol	91.62	85.78
TraesCS7D01G510600.1	Wheat	cytosol	91.62	85.78
TraesCS7B01G437600.1	Wheat	cytosol	91.62	85.78
EER90101	Sorghum	cytosol	91.62	85.78
TraesCS7A01G520800.1	Wheat	golgi	91.62	85.78
TraesCS6D01G135100.1	Wheat	plastid	91.1	85.29
Zm00001d036756_P001	Maize	cytosol	42.41	81.82
Zm00001d015526_P002	Maize	cytosol	90.58	81.6
Zm00001d036758_P002	Maize	extracellular	48.69	80.87
HORVU6Hr1G065260.1	Barley	cytosol	20.42	78.0
Zm00001d046600_P001	Maize	cytosol	90.05	74.78
HORVU7Hr1G115980.1	Barley	plastid	91.1	65.66
GSMUA_Achr10P...	Banana	extracellular	14.14	49.09
GSMUA_AchrUn_...	Banana	extracellular	12.04	22.12
GSMUA_Achr11P...	Banana	cytosol	24.61	21.27
GSMUA_Achr2P00960_001	Banana	plasma membrane	24.61	21.27
GSMUA_Achr5P18150_001	Banana	cytosol, mitochondrion, peroxisome, plastid	16.23	20.67

Protein Annotations

MapMan:19.2.6.1.2.3	Gene3D:3.60.20.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0004298	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005839	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0019774	GO:GO:0043161	GO:GO:0051603
EnsemblPlantsGene:GSMUA_Achr9G13190_001	EnsemblPlants:GSMUA_Achr9P13190_001	EnsemblPlants:GSMUA_Achr9T13190_001	InterPro:IPR023333	InterPro:IPR029055	UniProt:M0TZX7
InterPro:Ntn_hydrolases_N	PFAM:PF00227	PFscan:PS51476	PANTHER:PTHR11599	PANTHER:PTHR11599:SF104	InterPro:Proteasome_beta_3
InterPro:Proteasome_suB-type	InterPro:Proteasome_sua/b	SUPFAM:SSF56235	UniParc:UPI0002957AED	:	:

Description

Proteasome subunit beta type-3 [Source:GMGC_GENE;Acc:GSMUA_Achr9G13190_001]

Coordinates

chr9:+:8584743..8590142

Molecular Weight (calculated)

21438.9 Da

IEP (calculated)

5.315

GRAVY (calculated)

-0.117

Length

191 amino acids

Sequence
(BLAST)

001: MVGKNCFAIA SDRRLGVNLQ TVATDFQRIF KIHDKLYIGL SGLATDAQTM YQRLVFRHKL YQLREERDMK PQTFASLVSA LLYEKRFGPY FCQPVIAGLG
101: DDDVPFICTM DCLGAKELAK DFVVSGTASE SLYGACESMY KPNMEPEELF ETISQALLSS VDRDCLSGWG GHVLLVTPTE VQERTLKGRM D

Best Arabidopsis Sequence Match ( AT1G21720.1 )
(BLAST)

001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD

Arabidopsis Description

PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.