Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 2
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038565.1-P | Field mustard | cytosol | 98.54 | 99.51 |
| CDY04667 | Canola | cytosol | 98.54 | 99.51 |
| CDY08181 | Canola | cytosol | 98.54 | 99.51 |
| CDY67773 | Canola | extracellular | 92.23 | 99.48 |
| Bra012292.1-P | Field mustard | cytosol | 98.06 | 99.02 |
| CDY00398 | Canola | extracellular | 98.06 | 99.02 |
| CDY71260 | Canola | cytosol | 91.75 | 98.95 |
| AT1G21720.1 | Thale cress | cytosol | 97.57 | 98.53 |
| CDY38347 | Canola | extracellular | 91.26 | 98.43 |
| Solyc04g009410.2.1 | Tomato | extracellular | 91.26 | 92.16 |
| Zm00001d036756_P001 | Maize | cytosol | 44.17 | 91.92 |
| KRH16390 | Soybean | nucleus | 90.78 | 91.67 |
| KRH17983 | Soybean | endoplasmic reticulum | 90.78 | 91.67 |
| PGSC0003DMT400082475 | Potato | cytosol | 90.29 | 91.18 |
| VIT_18s0001g02260.t01 | Wine grape | cytosol | 89.32 | 90.2 |
| Os06t0643100-01 | Rice | plasma membrane | 86.89 | 87.75 |
| EES06388 | Sorghum | cytosol | 86.89 | 87.75 |
| CDY70670 | Canola | cytosol, mitochondrion | 67.96 | 87.5 |
| EER90101 | Sorghum | cytosol | 86.41 | 87.25 |
| TraesCS6A01G145800.1 | Wheat | cytosol | 86.41 | 87.25 |
| TraesCS6B01G174200.1 | Wheat | golgi | 86.41 | 87.25 |
| TraesCS6D01G135100.1 | Wheat | plastid | 86.41 | 87.25 |
| HORVU0Hr1G015750.1 | Barley | cytosol | 85.92 | 86.76 |
| TraesCS7D01G510600.1 | Wheat | cytosol | 85.44 | 86.27 |
| Os02t0182500-01 | Rice | cytosol | 85.44 | 86.27 |
| TraesCS7A01G520800.1 | Wheat | golgi | 84.95 | 85.78 |
| TraesCS7B01G437600.1 | Wheat | cytosol | 84.95 | 85.78 |
| CDY40893 | Canola | mitochondrion | 67.96 | 84.85 |
| Zm00001d015526_P002 | Maize | cytosol | 85.44 | 83.02 |
| CDY40889 | Canola | mitochondrion | 30.58 | 76.83 |
| Zm00001d046600_P001 | Maize | cytosol | 83.98 | 75.22 |
| Zm00001d036758_P002 | Maize | extracellular | 41.75 | 74.78 |
| HORVU6Hr1G065260.1 | Barley | cytosol | 17.48 | 72.0 |
| HORVU7Hr1G115980.1 | Barley | plastid | 84.47 | 65.66 |
| GSMUA_Achr10P... | Banana | extracellular | 12.62 | 47.27 |
| CDX71344 | Canola | cytosol | 26.7 | 24.66 |
| CDX89080 | Canola | cytosol | 26.7 | 24.66 |
| CDY52345 | Canola | cytosol | 26.21 | 24.22 |
| CDX67842 | Canola | cytosol | 26.21 | 24.22 |
| CDX71775 | Canola | cytosol | 26.21 | 24.22 |
| CDY56729 | Canola | cytosol | 26.21 | 24.22 |
| CDX71420 | Canola | plastid | 9.71 | 16.26 |
| CDX95297 | Canola | cytosol | 10.68 | 16.06 |
| CDY46344 | Canola | endoplasmic reticulum | 20.39 | 15.91 |
| CDY07280 | Canola | endoplasmic reticulum, plasma membrane | 14.56 | 14.71 |
| CDY08180 | Canola | plastid | 11.16 | 10.36 |
Protein Annotations
| MapMan:19.2.6.1.2.3 | Gene3D:3.60.20.10 | GO:A0A078EJL7 | EnsemblPlants:CDY01316 | ProteinID:CDY01316 | ProteinID:CDY01316.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004175 | GO:GO:0004298 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005839 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 |
| GO:GO:0016787 | GO:GO:0019538 | GO:GO:0019774 | GO:GO:0043161 | GO:GO:0051603 | EnsemblPlantsGene:GSBRNA2T00112266001 |
| InterPro:IPR023333 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | ScanProsite:PS00854 | PFscan:PS51476 |
| PANTHER:PTHR11599 | PANTHER:PTHR11599:SF104 | InterPro:Proteasome_beta_3 | InterPro:Proteasome_bsu_CS | InterPro:Proteasome_suB-type | InterPro:Proteasome_sua/b |
| SUPFAM:SSF56235 | UniParc:UPI0004EEB7ED | : | : | : | : |
Description
BnaA07g10890D
Coordinates
chrLK031926:-:164111..166052
Molecular Weight (calculated)
23058.9 Da
IEP (calculated)
5.110
GRAVY (calculated)
-0.052
Length
206 amino acids
Sequence
(BLAST)
(BLAST)
001: MSMQIFEYNG SAVVAMVGKN CFAIASDRRL GVQLQTIATD FQRISKIHDR VFIGLSGLAT DVQTLYQRLV FRHKLYQLRE ERDMKPETFA SLVSAILYEK
101: RFGPYLCQPV IAGLGEDDKP FICTMDSIGA KELAKDFVVS GTASESLYGA CEAMYKPDME AEELFETISQ ALLSSVDRDC LSGWGGHVYV VTPTEIKERI
201: LKGRMD
101: RFGPYLCQPV IAGLGEDDKP FICTMDSIGA KELAKDFVVS GTASESLYGA CEAMYKPDME AEELFETISQ ALLSSVDRDC LSGWGGHVYV VTPTEIKERI
201: LKGRMD
001: MSIFEYNGSA VVAMVGKNCF AIASDRRLGV QLQTIATDFQ RISKIHDRVF IGLSGLATDV QTLYQRLVFR HKLYQLREER DMKPETFASL VSAILYEKRF
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD
101: GPYLCQPVIA GLGDDDKPFI CTMDSIGAKE LAKDFVVSGT ASESLYGACE AMYKPDMEAE ELFETISQAL LSSVDRDCLS GWGGHVYIVT PTEIKERILK
201: GRMD
Arabidopsis Description
PBC1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178WJZ7]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.