Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 4
- golgi 4
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d011021_P001 | Maize | cytosol, extracellular, mitochondrion, plastid | 25.0 | 80.49 |
| CDX67842 | Canola | cytosol | 47.35 | 56.05 |
| CDX71775 | Canola | cytosol | 47.35 | 56.05 |
| CDY52345 | Canola | cytosol | 47.35 | 56.05 |
| CDY56729 | Canola | cytosol | 46.97 | 55.61 |
| CDX89080 | Canola | cytosol | 46.59 | 55.16 |
| CDX71344 | Canola | cytosol | 46.21 | 54.71 |
| OQU89746 | Sorghum | cytosol | 36.74 | 52.43 |
| GSMUA_Achr5P18150_001 | Banana | cytosol, mitochondrion, peroxisome, plastid | 29.55 | 52.0 |
| PGSC0003DMT400058139 | Potato | cytosol | 42.8 | 50.67 |
| KRH45659 | Soybean | endoplasmic reticulum, nucleus | 42.8 | 50.67 |
| KRG99348 | Soybean | nucleus | 42.8 | 50.67 |
| PGSC0003DMT400009060 | Potato | cytosol | 42.42 | 50.22 |
| Solyc02g084920.2.1 | Tomato | plastid | 42.05 | 49.78 |
| Zm00001d021051_P002 | Maize | mitochondrion | 41.67 | 49.77 |
| Zm00001d006085_P002 | Maize | extracellular | 41.29 | 49.32 |
| TraesCS5D01G292900.1 | Wheat | cytosol | 40.53 | 48.42 |
| TraesCS5B01G284800.1 | Wheat | cytosol | 40.53 | 48.42 |
| TraesCS5A01G285600.1 | Wheat | plastid | 40.53 | 48.42 |
| GSMUA_Achr11P... | Banana | cytosol | 40.53 | 48.42 |
| Os09t0505600-01 | Rice | plastid | 40.15 | 47.96 |
| Os08t0529100-01 | Rice | cytosol | 39.77 | 47.95 |
| GSMUA_Achr2P00960_001 | Banana | plasma membrane | 39.77 | 47.51 |
| EES15319 | Sorghum | cytosol | 38.26 | 46.12 |
| Zm00001d031599_P001 | Maize | cytosol, extracellular | 38.26 | 46.12 |
| HORVU5Hr1G076130.2 | Barley | plastid | 40.53 | 41.47 |
| VIT_01s0146g00300.t01 | Wine grape | plastid | 28.41 | 39.06 |
| Zm00001d043281_P001 | Maize | cytosol | 15.91 | 38.89 |
| Zm00001d018456_P001 | Maize | cytosol | 15.91 | 38.89 |
| CDX95297 | Canola | cytosol | 17.8 | 34.31 |
| GSMUA_AchrUn_... | Banana | extracellular | 12.88 | 32.69 |
| CDX71420 | Canola | plastid | 14.39 | 30.89 |
| CDY07280 | Canola | endoplasmic reticulum, plasma membrane | 20.08 | 25.98 |
| CDY40889 | Canola | mitochondrion | 6.82 | 21.95 |
| CDY08181 | Canola | cytosol | 16.29 | 21.08 |
| CDY04667 | Canola | cytosol | 16.29 | 21.08 |
| CDY00398 | Canola | extracellular | 16.29 | 21.08 |
| CDY38347 | Canola | extracellular | 15.15 | 20.94 |
| CDY67773 | Canola | extracellular | 15.15 | 20.94 |
| CDY71260 | Canola | cytosol | 15.15 | 20.94 |
| CDY40893 | Canola | mitochondrion | 12.88 | 20.61 |
| CDY01316 | Canola | cytosol | 15.91 | 20.39 |
| CDY70670 | Canola | cytosol, mitochondrion | 11.74 | 19.38 |
| CDY08180 | Canola | plastid | 8.71 | 10.36 |
Protein Annotations
| MapMan:19.2.6.1.2.6 | Gene3D:2.60.120.330 | Gene3D:3.60.20.10 | GO:A0A078IAK6 | UniProt:A0A078IAK6 | EnsemblPlants:CDY46344 |
| ProteinID:CDY46344 | ProteinID:CDY46344.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004298 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005839 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0051603 | EnsemblPlantsGene:GSBRNA2T00083764001 | InterPro:IPNS-like |
| InterPro:IPR027443 | InterPro:IPR029055 | InterPro:Ntn_hydrolases_N | PFAM:PF00227 | PANTHER:PTHR11599 | PANTHER:PTHR11599:SF107 |
| InterPro:Proteasome_sua/b | SUPFAM:SSF51197 | SUPFAM:SSF56235 | UniParc:UPI0004EE741E | : | : |
Description
BnaC01g30260DBnaC01g30260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IAK6]
Coordinates
chrLK032662:+:81686..83590
Molecular Weight (calculated)
30020.3 Da
IEP (calculated)
8.048
GRAVY (calculated)
-0.040
Length
264 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRTINSVFR LFSSSLPLFV DVNCIDRFCF AEHVWPSLDP ITASSTGYSI LTRDYSKIHK IADKAVLSSS GFQDDVKALQ KVCQHQHNKQ MSCPAMAQLL
101: SNTLYFKRFF HYYAFNFLGG LDEEGKGCVF TYDTVGSYEK VGYSAQGSGS TLIMPFLDNQ LKSPSPFLLP AQICLMLSHL FPSLDLIMSN GIYKSLVHRV
201: VTNMEKERIS VAMFCVPGGD QEIQPVEALV TETRPRLYKT VKKYVEFYFE YYQQGRRPIE ATLI
101: SNTLYFKRFF HYYAFNFLGG LDEEGKGCVF TYDTVGSYEK VGYSAQGSGS TLIMPFLDNQ LKSPSPFLLP AQICLMLSHL FPSLDLIMSN GIYKSLVHRV
201: VTNMEKERIS VAMFCVPGGD QEIQPVEALV TETRPRLYKT VKKYVEFYFE YYQQGRRPIE ATLI
001: MTKQHANWSP YDNNGGTCVA IAGSDYCVIA ADTRMSTGYS ILSRDYSKIH KLADRAVLSS SGFQADVKAL QKVLKSRHLI YQHQHNKQMS CPAMAQLLSN
101: TLYFKRFFPY YAFNVLGGLD EEGKGCVFTY DAVGSYERVG YGAQGSGSTL IMPFLDNQLK SPSPLLLPKQ DSNTPLSEAE AVDLVKTVFA SATERDIYTG
201: DKLEIMILKA DGIKTELMDL RKD
101: TLYFKRFFPY YAFNVLGGLD EEGKGCVFTY DAVGSYERVG YGAQGSGSTL IMPFLDNQLK SPSPLLLPKQ DSNTPLSEAE AVDLVKTVFA SATERDIYTG
201: DKLEIMILKA DGIKTELMDL RKD
Arabidopsis Description
PBF1Proteasome subunit beta type [Source:UniProtKB/TrEMBL;Acc:A0A178V6R9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.