Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 3
- plasma membrane 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS5B01G050200.1 | Wheat | cytosol | 68.21 | 68.02 |
TraesCS5D01G056000.1 | Wheat | cytosol | 68.21 | 68.02 |
TraesCS5A01G046100.2 | Wheat | cytosol | 67.93 | 67.75 |
HORVU5Hr1G011170.1 | Barley | cytosol | 67.66 | 67.48 |
Os12t0612100-01 | Rice | cytosol | 67.12 | 67.12 |
GSMUA_Achr4P31690_001 | Banana | extracellular, vacuole | 43.75 | 43.51 |
VIT_10s0003g05000.t01 | Wine grape | cytosol | 37.5 | 36.8 |
EES16792 | Sorghum | cytosol | 29.89 | 25.29 |
KXG33927 | Sorghum | plastid | 22.01 | 20.82 |
Protein Annotations
EnsemblPlants:KXG23983 | EnsemblPlantsGene:SORBI_3008G167600 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0080048 |
InterPro:GDPGP | PANTHER:PTHR20884 | PANTHER:PTHR20884:SF9 | ProteinID:KXG23983 | ProteinID:KXG23983.1 | UniParc:UPI00022072B3 |
UniProt:A0A1B6PE71 | MapMan:35.1 | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:-:60161579..60164342
Molecular Weight (calculated)
40798.4 Da
IEP (calculated)
4.863
GRAVY (calculated)
-0.040
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSATKVEGE YSFLSKNSHL DQSEGVKIHL YQFGAEHRNE KLKSFACSVQ DGPSLLDMLL LSQWDNFAWK GHLDYDVTAC QLKVIGGGRN FVGQLNNKWN
101: PFSLKEYDKF FESFECLKPN SMKSYDGLLL GIAQGENDRP EVAPSASPPK DGLLVIANTY PVEYGHIFLV PSAIHQLSCY WDKRMIGLAT KISSEVNNES
201: FKVFFDSGTS VVSGHMIFQA CYFAIPLPVE SASTFTVYDG KAGSDIIVSE TVDYPLKALV FTSTNLKTLV SVLSEISFSL HDNATAYSLL ISNNGTKVFL
301: FPQVKNLVTG CCLSAWECGG YFVYQTKFDF DNASETEISN RMGSVSLEDS TFEDLKHLCC AIADNLLM
101: PFSLKEYDKF FESFECLKPN SMKSYDGLLL GIAQGENDRP EVAPSASPPK DGLLVIANTY PVEYGHIFLV PSAIHQLSCY WDKRMIGLAT KISSEVNNES
201: FKVFFDSGTS VVSGHMIFQA CYFAIPLPVE SASTFTVYDG KAGSDIIVSE TVDYPLKALV FTSTNLKTLV SVLSEISFSL HDNATAYSLL ISNNGTKVFL
301: FPQVKNLVTG CCLSAWECGG YFVYQTKFDF DNASETEISN RMGSVSLEDS TFEDLKHLCC AIADNLLM
001: MLKIKRVPTV VSNYQKDDGA EDPVGCGRNC LGACCLNGAR LPLYACKNLV KSGEKLVISH EAIEPPVAFL ESLVLGEWED RFQRGLFRYD VTACETKVIP
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
101: GKYGFVAQLN EGRHLKKRPT EFRVDKVLQS FDGSKFNFTK VGQEELLFQF EAGEDAQVQF FPCMPIDPEN SPSVVAINVS PIEYGHVLLI PRVLDCLPQR
201: IDHKSLLLAV HMAAEAANPY FRLGYNSLGA FATINHLHFQ AYYLAMPFPL EKAPTKKITT TVSGVKISEL LSYPVRSLLF EGGSSMQELS DTVSDCCVCL
301: QNNNIPFNIL ISDCGRQIFL MPQCYAEKQA LGEVSPEVLE TQVNPAVWEI SGHMVLKRKE DYEGASEDNA WRLLAEASLS EERFKEVTAL AFEAIGCSNQ
401: EEDLEGTIVH QQNSSGNVNQ KSNRTHGGPI TNGTAAECLV LQ
Arabidopsis Description
VTC2GDP-L-galactose phosphorylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWE8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.