Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G046100.2 | Wheat | cytosol | 69.84 | 69.65 |
| HORVU5Hr1G011170.1 | Barley | cytosol | 69.57 | 69.38 |
| TraesCS5B01G050200.1 | Wheat | cytosol | 69.57 | 69.38 |
| TraesCS5D01G056000.1 | Wheat | cytosol | 69.29 | 69.11 |
| KXG23983 | Sorghum | cytosol | 67.12 | 67.12 |
| GSMUA_Achr4P31690_001 | Banana | extracellular, vacuole | 43.48 | 43.24 |
| VIT_10s0003g05000.t01 | Wine grape | cytosol | 35.05 | 34.4 |
| Os12t0190000-01 | Rice | cytosol | 31.25 | 26.26 |
| Os01t0901300-01 | Rice | cytosol | 6.52 | 16.33 |
Protein Annotations
| MapMan:35.1 | EntrezGene:4352773 | ProteinID:ABA99379.1 | EMBL:AK101614 | ProteinID:BAF30275.1 | ProteinID:BAT18045.1 |
| ProteinID:EEE53596.1 | InterPro:GDPGP | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005975 | GO:GO:0006006 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016740 | GO:GO:0080048 | EnsemblPlantsGene:Os12g0612100 | EnsemblPlants:Os12t0612100-01 | PANTHER:PTHR20884 | PANTHER:PTHR20884:SF9 |
| UniProt:Q2QMA2 | UniParc:UPI0000680C49 | RefSeq:XP_015620659.1 | : | : | : |
Description
Conserved hypothetical protein. (Os12t0612100-01);Conserved hypothetical protein. (Os12t0612100-02)
Coordinates
chr12:-:25888964..25892988
Molecular Weight (calculated)
41065.8 Da
IEP (calculated)
4.957
GRAVY (calculated)
-0.045
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSTTEFKGE YSLPSKKSPL DQFEGVKTHL YRLGAEHENG TLKSFAYTDQ GSPSLLDTII LSQWEDYAWK GHFGYDVTAC NLKVVEGGWS FVVQLNDKWN
101: SCVLKEHDKF LEPVGCLKPN CMNSYDELLL CIAQGDKDIP EVVPSTKPPK DGLLLIANAY PVEYGHIFLV PSATNQLSFF WDKRMFSLIA RIASEVNSAA
201: FRVFFDSCTS TMPDHMFFQA CYFANPLPVE SASTVAIYHG KATSAVHLYE IIDYPMKALV LTGKDVNTLA NFVSEVSLTL HDNNTAYSLL ISNNGTKVFL
301: FPQVKNLATG CCLSAWECSG YFIYRAKYDF DRASENEISN RMASVTLQDG AFENLKNLCC AVADDLVM
101: SCVLKEHDKF LEPVGCLKPN CMNSYDELLL CIAQGDKDIP EVVPSTKPPK DGLLLIANAY PVEYGHIFLV PSATNQLSFF WDKRMFSLIA RIASEVNSAA
201: FRVFFDSCTS TMPDHMFFQA CYFANPLPVE SASTVAIYHG KATSAVHLYE IIDYPMKALV LTGKDVNTLA NFVSEVSLTL HDNNTAYSLL ISNNGTKVFL
301: FPQVKNLATG CCLSAWECSG YFIYRAKYDF DRASENEISN RMASVTLQDG AFENLKNLCC AVADDLVM
001: MLLKIKRVPT VVSNYQKDET VEEGGCGRNC LSKCCINGAR LPLYTCKNLD KSVGENTESP VTFLESLVIG EWEDRFQRGL FRYDVTACET KVIPGKYGFI
101: AQLNEGRHLK KRPTEFRVDK VLQPFDGNKF NFTKVGQEEL LFQFKASTND DDSEIQFLAS MPLDADNSPS VVAINVSPIE YGHVLLIPRV LDCLPQRIDH
201: KSLLLALQMA AEADNPYFRL GYNSLGAFAT INHLHFQAYY LAMQFPIEKA SSLKITTTNN GVKISKLLNY PVRGLLVEGG NTIKDLADTV SDASVCLQNN
301: NIPFNILISD SGKRIFLLPQ CYAEKQALGE VSSTLLDTQV NPAVWEMSGH MVLKRKEDYE GASEEKAWRL LAEVSLSEER FREVNTMIFD AIGFSSHEEE
401: EEEELEEQNS MNGGSFTIVH CPSVKEEAVS N
101: AQLNEGRHLK KRPTEFRVDK VLQPFDGNKF NFTKVGQEEL LFQFKASTND DDSEIQFLAS MPLDADNSPS VVAINVSPIE YGHVLLIPRV LDCLPQRIDH
201: KSLLLALQMA AEADNPYFRL GYNSLGAFAT INHLHFQAYY LAMQFPIEKA SSLKITTTNN GVKISKLLNY PVRGLLVEGG NTIKDLADTV SDASVCLQNN
301: NIPFNILISD SGKRIFLLPQ CYAEKQALGE VSSTLLDTQV NPAVWEMSGH MVLKRKEDYE GASEEKAWRL LAEVSLSEER FREVNTMIFD AIGFSSHEEE
401: EEEELEEQNS MNGGSFTIVH CPSVKEEAVS N
Arabidopsis Description
VTC5VTC5 [Source:UniProtKB/TrEMBL;Acc:A0A178UIM1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.