Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- plasma membrane 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G056000.1 | Wheat | cytosol | 94.31 | 94.31 |
| TraesCS5B01G050200.1 | Wheat | cytosol | 93.77 | 93.77 |
| TraesCS5A01G046100.2 | Wheat | cytosol | 91.6 | 91.6 |
| Os12t0612100-01 | Rice | cytosol | 69.38 | 69.57 |
| KXG23983 | Sorghum | cytosol | 67.48 | 67.66 |
| GSMUA_Achr4P31690_001 | Banana | extracellular, vacuole | 41.46 | 41.35 |
| VIT_10s0003g05000.t01 | Wine grape | cytosol | 36.04 | 35.47 |
| HORVU4Hr1G017030.1 | Barley | cytosol | 30.08 | 25.75 |
| HORVU5Hr1G031870.1 | Barley | cytosol | 29.54 | 25.23 |
| HORVU6Hr1G054830.1 | Barley | cytosol | 6.23 | 21.9 |
| HORVU5Hr1G075160.1 | Barley | plastid | 18.43 | 21.86 |
| HORVU3Hr1G089030.13 | Barley | plastid | 23.31 | 20.77 |
| HORVU5Hr1G100430.1 | Barley | mitochondrion | 14.63 | 20.45 |
| HORVU6Hr1G083130.2 | Barley | extracellular | 13.01 | 20.08 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G011170.1 | EnsemblPlantsGene:HORVU5Hr1G011170 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0016740 | GO:GO:0080048 |
| InterPro:GDPGP | PANTHER:PTHR20884 | PANTHER:PTHR20884:SF9 | UniParc:UPI000296C051 | UniProt:M0UXL0 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr5H:-:28950812..28955560
Molecular Weight (calculated)
40718.2 Da
IEP (calculated)
4.639
GRAVY (calculated)
-0.038
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSATKLEGG YSFDSKNSPL DQPEGVKIHL YRLGIEQCEH DALKSFACAG QGSPSLLDTI ILSQWENFAQ KGQLGYDVTT CELKVIEGQR DFVIQMNDKW
101: NSFSLKKYDK FGLPFGCLKP NSGRSYEELL LCIAEGENSE PEVVPSTTPP NNGVLLIANA YPVEYGHIFL VPNATNQLSS FWDKRMFGLI TKIASEVNSA
201: AFRVFFDDGT SIVPKHMFFQ ACYFANPLPV ESASTVALYD GTTRSGICVS EIVDYPLKAI VFTSNNVNAL IDVVSAACLA LHENNTAHSL MISNNGRNAF
301: LFPQVKNLVT GCYLSAWECC GYFVYHTKVD FEQASETGIS NRMASFSFQD GDFEDLKKLC CAIADDLVT
101: NSFSLKKYDK FGLPFGCLKP NSGRSYEELL LCIAEGENSE PEVVPSTTPP NNGVLLIANA YPVEYGHIFL VPNATNQLSS FWDKRMFGLI TKIASEVNSA
201: AFRVFFDDGT SIVPKHMFFQ ACYFANPLPV ESASTVALYD GTTRSGICVS EIVDYPLKAI VFTSNNVNAL IDVVSAACLA LHENNTAHSL MISNNGRNAF
301: LFPQVKNLVT GCYLSAWECC GYFVYHTKVD FEQASETGIS NRMASFSFQD GDFEDLKKLC CAIADDLVT
001: MALPPYDPNF KFAFSLGTIA KHQDYDESAS AAVVALDLIS SARFALKLDS VYTEYSAKYV VDNAAGSHSG RKLTVKDCLE FALNKGGIPK AEDWPRLGSV
101: ITPPSSYKPD LVSMKGQVIE PQTIEEACDM VVDQPVGAKL HVFKPHIELQ QDASAITGIY CGTSGEPASY VGLRDAIIVG VEKIQGKSIG TVKVWYKKFI
201: FLKVAMSRWF QLYSPDGTHT GIKRTDYLVD FCVPRLSMD
101: ITPPSSYKPD LVSMKGQVIE PQTIEEACDM VVDQPVGAKL HVFKPHIELQ QDASAITGIY CGTSGEPASY VGLRDAIIVG VEKIQGKSIG TVKVWYKKFI
201: FLKVAMSRWF QLYSPDGTHT GIKRTDYLVD FCVPRLSMD
Arabidopsis Description
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G51670.1); Has 39 Blast hits to 39 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: /.../BLink). [Source:TAIR;Acc:AT1G48180]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.